Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02657 and RBAM_016130

See DNA alignment / Visit BSNT_02657 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence pep-align/BSNT_02657.1.9828.seq
#    -bsequence pep-align/RBAM_016130.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02657-RBAM_016130.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02657-RBAM_016130.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02657
# 2: RBAM_016130
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 71
# Identity:      60/71 (84.5%)
# Similarity:    66/71 (93.0%)
# Gaps:           0/71 ( 0.0%)
# Score: 311.0
# 
#
#=======================================

BSNT_02657         1 MIKVTRLNGQPFTLNALFIEQIECFPDTTITLSNGKKFVVKEDEEAVLEK     50
                     ||:|||||||||||||||||||||||||||||||||||||||.|||||:|
RBAM_016130        1 MIQVTRLNGQPFTLNALFIEQIECFPDTTITLSNGKKFVVKEPEEAVLKK     50

BSNT_02657        51 IAAFYRKIQIFAMDQGIEEPE     71
                     :.:||..||||::||||||.|
RBAM_016130       51 VISFYHSIQIFSLDQGIEEEE     71


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