Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02608 and RBAM_015760

See DNA alignment / Visit BSNT_02608 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence pep-align/BSNT_02608___rnc.1.9828.seq
#    -bsequence pep-align/RBAM_015760___rnc.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02608___rnc-RBAM_015760___rnc.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02608___rnc-RBAM_015760___rnc.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02608___rnc
# 2: RBAM_015760___rnc
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     237/249 (95.2%)
# Similarity:   246/249 (98.8%)
# Gaps:           0/249 ( 0.0%)
# Score: 1241.0
# 
#
#=======================================

BSNT_02608___      1 MSKHSHYKDKKKFYKKVEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEH     50
                     ||||||:|||||||||:|||||||||||||||||||||||||||||||||
RBAM_015760__      1 MSKHSHFKDKKKFYKKIEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEH     50

BSNT_02608___     51 RKKPYEDNERLEFLGDAVLELTISRFLFAKYPAMSEGDLTKLRAAIVCEP    100
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_015760__     51 RKKPYEDNERLEFLGDAVLELTISQFLFAKYPAMSEGDLTKLRAAIVCEP    100

BSNT_02608___    101 SLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADVFEAFIGALYLDQGL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015760__    101 SLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADVFEAFIGALYLDQGL    150

BSNT_02608___    151 EPVESFLKVYVFPKINDGAFSHVMDFKSQLQEYVQRDGKGSLEYKISNEK    200
                     :||:.|||||||||||||||||||||||||||:|||||||||||||.|||
RBAM_015760__    151 DPVQQFLKVYVFPKINDGAFSHVMDFKSQLQEFVQRDGKGSLEYKILNEK    200

BSNT_02608___    201 GPAHNREFEAIVSLKGEPLGVGNGRSKKEAEQHAAQEALAKLQKHHTKQ    249
                     ||||||||||:||||||.||:||||||||||||||||||||:|||||||
RBAM_015760__    201 GPAHNREFEALVSLKGEALGIGNGRSKKEAEQHAAQEALAKMQKHHTKQ    249


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