Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02606 and RBAM_015740

See DNA alignment / Visit BSNT_02606 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence pep-align/BSNT_02606___fabG.1.9828.seq
#    -bsequence pep-align/RBAM_015740___fabG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02606___fabG-RBAM_015740___fabG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02606___fabG-RBAM_015740___fabG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02606___fabG
# 2: RBAM_015740___fabG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     224/246 (91.1%)
# Similarity:   242/246 (98.4%)
# Gaps:           0/246 ( 0.0%)
# Score: 1139.0
# 
#
#=======================================

BSNT_02606___      1 MLNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIK     50
                     |||:|||:||||||||||:|||||||:|.|||||||||||||||||||||
RBAM_015740__      1 MLNEKTAVVTGASRGIGRAIALDLAKNGCNVVVNYSGNEAKANEVVDEIK     50

BSNT_02606___     51 SMGRNAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNLIMR    100
                     |:|||||||||||||.|:||||:||.::.||:|||||||||||:|||:||
RBAM_015740__     51 SLGRNAIAVKADVSNSEEVQNMMKEAVAAFSSIDILVNNAGITKDNLLMR    100

BSNT_02606___    101 MKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPG    150
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015740__    101 MKENEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPG    150

BSNT_02606___    151 QANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQ    200
                     |||||||||||||||||||||||||||||||||||||||||||||:|:||
RBAM_015740__    151 QANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLSKEVQ    200

BSNT_02606___    201 DEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMVM    246
                     |||||||||||||:|||:|||||||||||:||||||||||||||||
RBAM_015740__    201 DEMLKQIPLARFGDPSDISSVVTFLASEGSRYMTGQTLHIDGGMVM    246


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