Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02601 and RBAM_015690

See DNA alignment / Visit BSNT_02601 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:27
# Commandline: needle
#    -asequence pep-align/BSNT_02601___sdaAA.1.9828.seq
#    -bsequence pep-align/RBAM_015690___sdaAA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02601___sdaAA-RBAM_015690___sdaAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02601___sdaAA-RBAM_015690___sdaAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02601___sdaAA
# 2: RBAM_015690___sdaAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     277/300 (92.3%)
# Similarity:   290/300 (96.7%)
# Gaps:           0/300 ( 0.0%)
# Score: 1370.0
# 
#
#=======================================

BSNT_02601___      1 MFRNVKELIEITKEKQILISDVMIAQEMEVTEKTKEDIFQQMDHNLSVME     50
                     ||||||||||||:||||.||:|||.||||||:||:|:|||.|:.||||||
RBAM_015690__      1 MFRNVKELIEITQEKQIPISEVMITQEMEVTQKTREEIFQGMERNLSVME     50

BSNT_02601___     51 AAVQKGLEGVTSQTGLTGGDAVKLQAYIRSGKSLSGPLILDAVSKAVATN    100
                     |||:|||:||||||||||||||||||||:||:||||.|||||||||||||
RBAM_015690__     51 AAVEKGLKGVTSQTGLTGGDAVKLQAYIQSGRSLSGNLILDAVSKAVATN    100

BSNT_02601___    101 EVNAAMGTICATPTAGSAGVVPGTLFAVKEKLNPTREQMIRFLFTAGAFG    150
                     |||||||||||||||||||||||||||||.||:||.||||||||||||||
RBAM_015690__    101 EVNAAMGTICATPTAGSAGVVPGTLFAVKHKLHPTTEQMIRFLFTAGAFG    150

BSNT_02601___    151 FVVANNASISGAAGGCQAEVGSASGMAAAAIVEMAGGTPEQSAEAMAITL    200
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_015690__    151 FVVANNASISGAAGGCQAEVGSASGMAAAAIVEMAGGTPQQSAEAMAITL    200

BSNT_02601___    201 KNMLGLVCDPVAGLVEVPCVKRNAMGASNAMIAADMALAGITSRIPCDEV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015690__    201 KNMLGLVCDPVAGLVEVPCVKRNAMGASNAMIAADMALAGITSRIPCDEV    250

BSNT_02601___    251 IDAMYKIGQTMPTALRETGQGGLAATPTGRELEKKIFGGALGSRETTSAN    300
                     |||||||||||||||||||||||||||||||||||||||||.|.:|.|||
RBAM_015690__    251 IDAMYKIGQTMPTALRETGQGGLAATPTGRELEKKIFGGALKSSDTPSAN    300


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