Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02569 and RBAM_015440

See DNA alignment / Visit BSNT_02569 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02569___ylnD.1.9828.seq
#    -bsequence pep-align/RBAM_015440___ylnD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02569___ylnD-RBAM_015440___ylnD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02569___ylnD-RBAM_015440___ylnD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02569___ylnD
# 2: RBAM_015440___ylnD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     218/257 (84.8%)
# Similarity:   239/257 (93.0%)
# Gaps:           0/257 ( 0.0%)
# Score: 1153.0
# 
#
#=======================================

BSNT_02569___      1 MGKVYIVGAGPGDPDLLTIKALKAIEKADVILYDRLVNKEILQYAKEQAD     50
                     ||||:|||||||||||||:||:|||:|||||||||||:|||||||.|:||
RBAM_015440__      1 MGKVFIVGAGPGDPDLLTVKAMKAIQKADVILYDRLVSKEILQYAGEEAD     50

BSNT_02569___     51 LIYCGKLPDFHTMKQETINRFLVKYAQKGKMVVRLKGGDPFVFGRGGEEA    100
                     |||||||||||.|||:||||||||||:|||.|||||||||||||||||||
RBAM_015440__     51 LIYCGKLPDFHIMKQDTINRFLVKYAKKGKTVVRLKGGDPFVFGRGGEEA    100

BSNT_02569___    101 ECLSENGIPFEIIPGITSGIAAAAYAGIPVTHREAGSNVAFVTGHYKKEE    150
                     |.|::|.|||||:||||||||||||||||||||||.|||||||||||:|:
RBAM_015440__    101 EALAQNAIPFEIVPGITSGIAAAAYAGIPVTHREASSNVAFVTGHYKQED    150

BSNT_02569___    151 DFEEKWKALATGIDTLVIYMGIKNVQQIERKLLENGRDGSTPAAFIHWGT    200
                     ||||||||||||||||||||||||::||||.|||||||..||||||||||
RBAM_015440__    151 DFEEKWKALATGIDTLVIYMGIKNIRQIERMLLENGRDAGTPAAFIHWGT    200

BSNT_02569___    201 TDKQKSVFCTVETLSETVIKENITNPSLIVIGNVVNYHYKLEWFESELKK    250
                     ||:||:|.|||.|||:|||||.|.||||||||:|||||.||:|:.||.|.
RBAM_015440__    201 TDRQKTVVCTVGTLSDTVIKEEIKNPSLIVIGDVVNYHCKLDWYASEQKN    250

BSNT_02569___    251 QDLSEAL    257
                     .||||||
RBAM_015440__    251 LDLSEAL    257


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