Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02564 and RBAM_015400

See DNA alignment / Visit BSNT_02564 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02564___cysH.1.9828.seq
#    -bsequence pep-align/RBAM_015400___cysH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02564___cysH-RBAM_015400___cysH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02564___cysH-RBAM_015400___cysH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02564___cysH
# 2: RBAM_015400___cysH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity:     213/233 (91.4%)
# Similarity:   225/233 (96.6%)
# Gaps:           0/233 ( 0.0%)
# Score: 1202.0
# 
#
#=======================================

BSNT_02564___      1 MLTYDNWEEPTITFPEDDPYKGALSVLKWAYGHYGNQLVYACSFGIEGIV     50
                     |||||.||||.|||||||.||||||||||||||||:||||||||||||||
RBAM_015400__      1 MLTYDTWEEPAITFPEDDSYKGALSVLKWAYGHYGDQLVYACSFGIEGIV     50

BSNT_02564___     51 LIDLIYKVKKDAEIVFLDTGLHFKETYETIERVKERYPGLNIILKKPDLT    100
                     |||||.|||||||||||||||||||||||||:|||||||||||||||.||
RBAM_015400__     51 LIDLISKVKKDAEIVFLDTGLHFKETYETIEKVKERYPGLNIILKKPSLT    100

BSNT_02564___    101 LEEQAEEHGDKLWEREPNQCCYLRKVVPLREALSGHPAWLSGLRRDQGPS    150
                     ||||||.|||||||||||||||:||::||||||:||||||||||||||||
RBAM_015400__    101 LEEQAEAHGDKLWEREPNQCCYIRKILPLREALAGHPAWLSGLRRDQGPS    150

BSNT_02564___    151 RANTNFLNKDEKFKSVKVCPLIHWTWKDIWRYTSRNELDYNPLHDQGYPS    200
                     ||||||||||:||:|:||||||||||||||||||::|||||.||||||||
RBAM_015400__    151 RANTNFLNKDDKFQSIKVCPLIHWTWKDIWRYTSKHELDYNILHDQGYPS    200

BSNT_02564___    201 IGCAPCTAPAFTAEDLRSGRWNGMAKTECGLHE    233
                     |||.|||:|||||||||||||||||||||||||
RBAM_015400__    201 IGCEPCTSPAFTAEDLRSGRWNGMAKTECGLHE    233


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