Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02554 and RBAM_015310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence pep-align/BSNT_02554___pyrP.1.9828.seq
# -bsequence pep-align/RBAM_015310___pyrP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02554___pyrP-RBAM_015310___pyrP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02554___pyrP-RBAM_015310___pyrP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02554___pyrP
# 2: RBAM_015310___pyrP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 409/466 (87.8%)
# Similarity: 421/466 (90.3%)
# Gaps: 32/466 ( 6.9%)
# Score: 2038.5
#
#
#=======================================
BSNT_02554___ 1 MPLCVKKQRGFFIQSLSHPKMKVNNQGEIIMSKKKVNLGVRDVPTPFSWV 50
||||||||||||||.|.||:
RBAM_015310__ 1 ------------------------------MSKKKVNLGVRDVPNPLSWL 20
BSNT_02554___ 51 SFSLQHLFAMFGSTILVPKLVGMSPAVALVTSGIGTLAYLLITKGQIPAY 100
|||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_015310__ 21 SFSLQHLFAMFGSTILVPKLVGMSPAVALVTSGIGTLAYLLVTKGQIPAY 70
BSNT_02554___ 101 LGSSFAFISPIILVKATGGPGAAMVGAFLAGLVYGLIALLIRQLGTGWLI 150
|||||||||||||||||||||||||||||||:|||||||||||||||||:
RBAM_015310__ 71 LGSSFAFISPIILVKATGGPGAAMVGAFLAGIVYGLIALLIRQLGTGWLM 120
BSNT_02554___ 151 KILPPVVVGPVIIVIGLGLASTAVNMAMYADPNASELVYSLKHFSVAGVT 200
|:||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_015310__ 121 KLLPPVVVGPVIIVIGLGLASTAVNMAMYADPNAKELVYSLKHFSVAGVT 170
BSNT_02554___ 201 LAITIICAIFLRGFLSLIPVLIGIIGGYLFALTQGIVNFQPVLDAKWFAV 250
||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_015310__ 171 LAITIICAIFLRGFLSLIPVLIGIIGGYLFALTQGIVNFQPVIDAKWFAV 220
BSNT_02554___ 251 PEFIIPFKDYSPSVTLGIAAAMVPVAFVTMSEHIGHQMVLSKVVGQDFIK 300
||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_015310__ 221 PEFIIPFKDYTPSVTLGIAAAMVPVAFVTMSEHIGHQMVLSKVVGQDFIK 270
BSNT_02554___ 301 KPGLHRSIMGDSVATILASLIGGPPTTTYGENIGVLAITRVFSVFVIGGA 350
||||||||||||||||:|||||||||||||||||||||||||||||||||
RBAM_015310__ 271 KPGLHRSIMGDSVATIIASLIGGPPTTTYGENIGVLAITRVFSVFVIGGA 320
BSNT_02554___ 351 AVIACCFGFIGKISALISSVPSAVMGGVSFLLFGIIASSGLRMLIDNKID 400
.|||.|||||||:||||||||||||||||||||||||||||||||||.||
RBAM_015310__ 321 GVIALCFGFIGKVSALISSVPSAVMGGVSFLLFGIIASSGLRMLIDNNID 370
BSNT_02554___ 401 YENNRNLIITSVILVIGVGGAFIQVSQGGFQVSGMALAAIVGVILNLILP 450
|||.||||||||||||||||||||||:||||:||||||||||||||||||
RBAM_015310__ 371 YENKRNLIITSVILVIGVGGAFIQVSKGGFQISGMALAAIVGVILNLILP 420
BSNT_02554___ 451 QAKEEQTDTSE--HHI 464
.|.||....|| :||
RBAM_015310__ 421 HANEEDAIASEKQNHI 436
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