Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02552 and RBAM_015290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence pep-align/BSNT_02552___ylyB.1.9828.seq
# -bsequence pep-align/RBAM_015290___ylyB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02552___ylyB-RBAM_015290___ylyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02552___ylyB-RBAM_015290___ylyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: RBAM_015290___ylyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity: 269/304 (88.5%)
# Similarity: 287/304 (94.4%)
# Gaps: 1/304 ( 0.3%)
# Score: 1431.0
#
#
#=======================================
BSNT_02552___ 1 MNQIDITASEEQKSERIDKFLASSENDWSRTQVQQWVKDGQVVVNGSAVK 50
|||.:||...|||||||||||||:..:|||||||||||:|.|.|||.:||
RBAM_015290__ 1 MNQFEITVQPEQKSERIDKFLASTGENWSRTQVQQWVKEGLVSVNGKSVK 50
BSNT_02552___ 51 ANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVV 100
||||:||||||.||:||||.||||||||||||||||||||||||||||||
RBAM_015290__ 51 ANYKMQPGDQVNVTIPEPEELDVLAEPMDLDIYYEDQDVLVVNKPRGMVV 100
BSNT_02552___ 101 HPAPGHLTGTLVNGLMAHCTDLSGINGVMRPGIVHRIDKDTSGLLMVAKN 150
||||||:||||||||||||.||||||||||||||||||||||||||||||
RBAM_015290__ 101 HPAPGHVTGTLVNGLMAHCNDLSGINGVMRPGIVHRIDKDTSGLLMVAKN 150
BSNT_02552___ 151 DMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMT 200
||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_015290__ 151 DMAHESLVNQLVNKTVTRKYTAVVHGVISHDDGTIDAPIGRDKKDRQSMT 200
BSNT_02552___ 201 VTRD-GKSAVTHFHVLERFQDFTLVECQLETGRTHQIRVHMRYIGFPLAG 249
|||: .|:|||||||||||||||||||:|||||||||||||:||||||||
RBAM_015290__ 201 VTRESSKNAVTHFHVLERFQDFTLVECRLETGRTHQIRVHMKYIGFPLAG 250
BSNT_02552___ 250 DPKYGPRKTIDFNGQALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENL 299
||||||||||||||||||||:|||||||||||:||||||||||.:|||:|
RBAM_015290__ 251 DPKYGPRKTIDFNGQALHAGILGFDHPRTGEYMEFEAPLPEDMKKLIEDL 300
BSNT_02552___ 300 RKNG 303
|.:.
RBAM_015290__ 301 RNSH 304
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