Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02550 and RBAM_015280

See DNA alignment / Visit BSNT_02550 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:21
# Commandline: needle
#    -asequence pep-align/BSNT_02550___lspA.1.9828.seq
#    -bsequence pep-align/RBAM_015280___lspA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02550___lspA-RBAM_015280___lspA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02550___lspA-RBAM_015280___lspA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02550___lspA
# 2: RBAM_015280___lspA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     129/154 (83.8%)
# Similarity:   139/154 (90.3%)
# Gaps:           3/154 ( 1.9%)
# Score: 664.5
# 
#
#=======================================

BSNT_02550___      1 MLYYMIALLIIAADQLTKWLVVKNMELGQSIPIIDQVFYITSHRNTGAAW     50
                     ||||:|||.||.||||||||||.:||||||||:||||.||||||||||||
RBAM_015280__      1 MLYYLIALFIIIADQLTKWLVVSHMELGQSIPVIDQVLYITSHRNTGAAW     50

BSNT_02550___     51 GILAGQMWFFYLITTAVIIGIVYYIQRYTKGQRFLGVALGLMLGGAIGNF    100
                     |||||||||||:||.|||||||||||||.|||..||::||||||||.|||
RBAM_015280__     51 GILAGQMWFFYVITIAVIIGIVYYIQRYAKGQMLLGISLGLMLGGAAGNF    100

BSNT_02550___    101 IDRAVRQEVVDFIHVIIV--NYPIFNIADSSLCVGVMLLFIQMLLDSGKK    148
                     ||||.|||||||||||||  :|||||||||||||||:||||.||.|||||
RBAM_015280__    101 IDRAARQEVVDFIHVIIVDYHYPIFNIADSSLCVGVILLFIHMLFDSGKK    150

BSNT_02550___    149 KKEQ    152
                     |:: 
RBAM_015280__    151 KEQ-    153


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