Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02548 and RBAM_015260

See DNA alignment / Visit BSNT_02548 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:20
# Commandline: needle
#    -asequence pep-align/BSNT_02548___ileS.1.9828.seq
#    -bsequence pep-align/RBAM_015260___ileS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02548___ileS-RBAM_015260___ileS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02548___ileS-RBAM_015260___ileS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02548___ileS
# 2: RBAM_015260___ileS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity:     881/921 (95.7%)
# Similarity:   909/921 (98.7%)
# Gaps:           0/921 ( 0.0%)
# Score: 4694.0
# 
#
#=======================================

BSNT_02548___      1 MDFKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKF     50
                     ||:|||||||||||||||||||||||:||.|||:||||||||||||||||
RBAM_015260__      1 MDYKDTLLMPKTDFPMRGNLPNREPDMQKDWEEQDIYRLVQERTKDRPKF     50

BSNT_02548___     51 VLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__     51 VLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLP    100

BSNT_02548___    101 IETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    101 IETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE    150

BSNT_02548___    151 NPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    151 NPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIE    200

BSNT_02548___    201 YQDKRSASIYVAFGVKDGKGVLENGERIIIWTTTPWTIPANLGISVHPDL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    201 YQDKRSASIYVAFGVKDGKGVLENGERIIIWTTTPWTIPANLGISVHPDL    250

BSNT_02548___    251 EYSVIAVGEDRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAEHP    300
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_015260__    251 EYSVIAVGEDRFVVASALVESVASACGFDQYEVTRTVKGKDLENIIAEHP    300

BSNT_02548___    301 LYGRDSLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDE    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    301 LYGRDSLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCPVDE    350

BSNT_02548___    351 KGVMTSEAPGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTK    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    351 KGVMTSEAPGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHDWRTK    400

BSNT_02548___    401 KPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDW    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    401 KPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRDRGDW    450

BSNT_02548___    451 CISRQRAWGVPIPVFYAENGEPIITDETIEHVSELFRQHGSNIWFEKEAK    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    451 CISRQRAWGVPIPVFYAENGEPIITDETIEHVSELFRQHGSNIWFEKEAK    500

BSNT_02548___    501 DLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDDLVRPADL    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    501 DLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDDLVRPADL    550

BSNT_02548___    551 YLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015260__    551 YLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSIG    600

BSNT_02548___    601 NVVVPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYRKIRNT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||:|||
RBAM_015260__    601 NVVVPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYRKVRNT    650

BSNT_02548___    651 FRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYDEYEF    700
                     |||||||||||:|..|||.|:|||||||||||||||||||||||||||||
RBAM_015260__    651 FRFLHGNLFDFNPSVNAVDVKDLREVDQYMLIKLNKLIDKVKKAYDEYEF    700

BSNT_02548___    701 AVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVFYETLLA    750
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_015260__    701 AVVYHSIHNFCTIELSSFYLDFAKDVVYIEHADHPDRRSMQTVFYETLLA    750

BSNT_02548___    751 LVKLSAPILPHTADELWSHLTFVEEQSVQLTDMPETIAVPNSEATEEKFD    800
                     ||||:||||||||||:||||:||||.||||||||||||||:|:|||||||
RBAM_015260__    751 LVKLTAPILPHTADEMWSHLSFVEEASVQLTDMPETIAVPDSQATEEKFD    800

BSNT_02548___    801 RFMALRDDVLKALETARNEKIIGKSLEANLKLYPNKENKELLASIKENLS    850
                     |||.||:||||||||||||||||:||||:|.|||||||::||:|||||::
RBAM_015260__    801 RFMELRNDVLKALETARNEKIIGRSLEASLTLYPNKENRDLLSSIKENIA    850

BSNT_02548___    851 QLFIVSELIISEENDAPNDAQSFATGKIAVEKAEGEMCERSRVISKDVGA    900
                     ||||||||.:.:|::||.:||||.|||:.||||||:||||||||||||||
RBAM_015260__    851 QLFIVSELTVKDESEAPENAQSFTTGKMTVEKAEGQMCERSRVISKDVGA    900

BSNT_02548___    901 NPKYPTLSLRNAEIVEKYYQK    921
                     |||||||||||||||||||||
RBAM_015260__    901 NPKYPTLSLRNAEIVEKYYQK    921


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