Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02532 and RBAM_015160

See DNA alignment / Visit BSNT_02532 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_02532___sigG.1.9828.seq
#    -bsequence pep-align/RBAM_015160___sigG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02532___sigG-RBAM_015160___sigG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02532___sigG-RBAM_015160___sigG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02532___sigG
# 2: RBAM_015160___sigG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     231/260 (88.8%)
# Similarity:   235/260 (90.4%)
# Gaps:          23/260 ( 8.8%)
# Score: 1169.0
# 
#
#=======================================

BSNT_02532___      1 -----------------------MGKLFRQLQDEGDDSAREKLVNGNLRL     27
                                            |.|||||||||||||||||||||||||
RBAM_015160__      1 MSRNKVEICGVDTSKLPVLKNEEMRKLFRQLQDEGDDSAREKLVNGNLRL     50

BSNT_02532___     28 VLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLSHNVKFSTYAVPMII     77
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015160__     51 VLSVIQRFNNRGEYVDDLFQVGCIGLMKSIDNFDLSHNVKFSTYAVPMII    100

BSNT_02532___     78 GEIRRYLRDNNPIRVSRSLRDIAYKALQVRERLISETSKEPTAEDIAKVL    127
                     ||||||||||||||||||||||||||||||||||||||:|||||:|||||
RBAM_015160__    101 GEIRRYLRDNNPIRVSRSLRDIAYKALQVRERLISETSREPTAEEIAKVL    150

BSNT_02532___    128 EVPHEEIVFALDAIQDPVSLFEPIYNDGGDPIYVMDQISDERNTDSQWIE    177
                     |||||||||||||||||||||||||||||||||||||||||||.|:||||
RBAM_015160__    151 EVPHEEIVFALDAIQDPVSLFEPIYNDGGDPIYVMDQISDERNKDTQWIE    200

BSNT_02532___    178 ELALKEGMRRLNDREKMILRKRFFQGKTQMEVAEEIGISQAQVSRLEKAA    227
                     ||||||||||||:|||||||||||||||||||||||||||||||||||||
RBAM_015160__    201 ELALKEGMRRLNEREKMILRKRFFQGKTQMEVAEEIGISQAQVSRLEKAA    250

BSNT_02532___    228 IKQMNKNIHQ    237
                     ||||||||||
RBAM_015160__    251 IKQMNKNIHQ    260


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.