Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02465 and RBAM_014690

See DNA alignment / Visit BSNT_02465 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence pep-align/BSNT_02465___ylaM.1.9828.seq
#    -bsequence pep-align/RBAM_014690___ylaM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02465___ylaM-RBAM_014690___ylaM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02465___ylaM-RBAM_014690___ylaM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02465___ylaM
# 2: RBAM_014690___ylaM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     255/309 (82.5%)
# Similarity:   284/309 (91.9%)
# Gaps:           0/309 ( 0.0%)
# Score: 1326.0
# 
#
#=======================================

BSNT_02465___      1 MVCRHNDELEALVKKAKKVTDKGEVASYIPALAKADKHDLSVAIYYSNNV     50
                     |||||..||:|||::|||.|::|:||.||||||::::..|||.||::.|.
RBAM_014690__      1 MVCRHYQELDALVQEAKKRTEEGKVADYIPALAESEQDSLSVTIYHAENT     50

BSNT_02465___     51 CLSAGDVEKTFTLQSISKVLSLALVLMEYGKDKVFSYVGQEPTGDPFNSI    100
                     ||:|||.::||||||||||||||||||:|||:||||.||||||||||||:
RBAM_014690__     51 CLTAGDADRTFTLQSISKVLSLALVLMDYGKEKVFSCVGQEPTGDPFNSM    100

BSNT_02465___    101 IKLETVNPSKPLNPMINAGALVVTSLIRGRTVKERLDYLLSFIRRLTNNQ    150
                     ||||||||.|||||||||||||||..|:|.:.|:||||||.|||||.|||
RBAM_014690__    101 IKLETVNPGKPLNPMINAGALVVTGFIKGHSPKDRLDYLLGFIRRLANNQ    150

BSNT_02465___    151 EITYCREVAESEYSTSMINRAMCYYMKQYGIFEDDVEAVMDLYTKQCAIE    200
                     :|||||.|||||:|:||||||||||||||.|||.|||.|||||||||||:
RBAM_014690__    151 DITYCRHVAESEFSSSMINRAMCYYMKQYDIFEGDVEEVMDLYTKQCAIK    200

BSNT_02465___    201 MNSLDLAKIGSVFALNGRHPETGEQVISKDVARICKTFMVTCGMYNASGE    250
                     |:||||||||.||||:|:|||||||||.||||||||||||||||||||||
RBAM_014690__    201 MSSLDLAKIGCVFALDGKHPETGEQVIKKDVARICKTFMVTCGMYNASGE    250

BSNT_02465___    251 FAIKVGIPAKSGVSGGIMGISPYDFGIGIFGPALDEKGNSIAGVKLLEIM    300
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
RBAM_014690__    251 FAIKVGIPAKSGVSGGIMGISPYNFGIGIFGPALDEKGNSIAGVKLLEIM    300

BSNT_02465___    301 SEMYRLSIF    309
                     ||.||||||
RBAM_014690__    301 SEKYRLSIF    309


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