Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02432 and RBAM_014440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence pep-align/BSNT_02432___pdhC.1.9828.seq
# -bsequence pep-align/RBAM_014440___pdhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02432___pdhC-RBAM_014440___pdhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02432___pdhC-RBAM_014440___pdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02432___pdhC
# 2: RBAM_014440___pdhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 423/443 (95.5%)
# Similarity: 431/443 (97.3%)
# Gaps: 2/443 ( 0.5%)
# Score: 2124.0
#
#
#=======================================
BSNT_02432___ 1 MAFEFKLPDIGEGIHEGEIVKWFVKPNDEVDEDDVLAEVQNDKAVVEIPS 50
||||||||||||||||||||||||||||||:|||||||||||||||||||
RBAM_014440__ 1 MAFEFKLPDIGEGIHEGEIVKWFVKPNDEVEEDDVLAEVQNDKAVVEIPS 50
BSNT_02432___ 51 PVKGKVLELKVEEGTVATVGQTIITFDAPGYEDLQFKGSDESDDAKTEAQ 100
|||||||||||||||||||||||||||||||||||||||.:|.|||||||
RBAM_014440__ 51 PVKGKVLELKVEEGTVATVGQTIITFDAPGYEDLQFKGSHDSGDAKTEAQ 100
BSNT_02432___ 101 VQSTAEAGKDVAKEEQAQEPAKATGAGQQDQAEVDPNKRVIAMPSVRKYA 150
|||:||||:|::|||..:||||.||||||||.|.||||||||||||||||
RBAM_014440__ 101 VQSSAEAGQDISKEETPKEPAKETGAGQQDQVEADPNKRVIAMPSVRKYA 150
BSNT_02432___ 151 REKGVDIRKVTGSGNNGRVVKEDIDSFVNGG-AQEAAPQETAAPQETAAK 199
|||||||||||||||||||||||||||.||| ||||||||||||||| ||
RBAM_014440__ 151 REKGVDIRKVTGSGNNGRVVKEDIDSFANGGAAQEAAPQETAAPQET-AK 199
BSNT_02432___ 200 PAAAPAPEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVDVTNL 249
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_014440__ 200 PAAAQAPEGEFPETREKMSGIRKAIAKAMVNSKHTAPHVTLMDEVDVTNL 249
BSNT_02432___ 250 VAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKTDEVI 299
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_014440__ 250 VAHRKQFKQVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKTDEVI 299
BSNT_02432___ 300 QKHYFNIGIAADTEKGLLVPVVKNADRKSVFEISDEINGLATKAREGKLA 349
||||||||||||||||||||||||||||:|||||||||.|||||||||||
RBAM_014440__ 300 QKHYFNIGIAADTEKGLLVPVVKNADRKAVFEISDEINSLATKAREGKLA 349
BSNT_02432___ 350 PAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAIVRDGEI 399
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_014440__ 350 PAEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKAIVRDGEI 399
BSNT_02432___ 400 VAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILMEA 442
|||||||||||||||||||||||||||||||||||||||||||
RBAM_014440__ 400 VAAPVLALSLSFDHRMIDGATAQNALNHIKRLLNDPQLILMEA 442
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