Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02419 and RBAM_014270

See DNA alignment / Visit BSNT_02419 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_02419___ykqC.1.9828.seq
#    -bsequence pep-align/RBAM_014270___ykqC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02419___ykqC-RBAM_014270___ykqC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02419___ykqC-RBAM_014270___ykqC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02419___ykqC
# 2: RBAM_014270___ykqC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 555
# Identity:     538/555 (96.9%)
# Similarity:   549/555 (98.9%)
# Gaps:           0/555 ( 0.0%)
# Score: 2788.0
# 
#
#=======================================

BSNT_02419___      1 MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGI     50
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_014270__      1 MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIVLIDAGIKFPEDELLGI     50

BSNT_02419___     51 DYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_014270__     51 DYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLA    100

BSNT_02419___    101 IGLLRNKLEEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGI    150
                     |||||||||||||||||||||||||||||||||:||||||||||||||||
RBAM_014270__    101 IGLLRNKLEEHGLLRQTKLNIIGEDDIVKFRKTSVSFFRTTHSIPDSYGI    150

BSNT_02419___    151 VVKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSE    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_014270__    151 VVKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSE    200

BSNT_02419___    201 NPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVQNGR    250
                     .|:|||||||||||||||||||||||||||||||||||||||||||.|||
RBAM_014270__    201 VPDFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVLNGR    250

BSNT_02419___    251 KVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRIPANKVTILCTGS    300
                     |||||||||||||||||.||||.||||||||||||||:||||||||||||
RBAM_014270__    251 KVAVFGRSMESAIEIGQNLGYITCPKNTFIEHNEINRLPANKVTILCTGS    300

BSNT_02419___    301 QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYR    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_014270__    301 QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYR    350

BSNT_02419___    351 AGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHV    400
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_014270__    351 AGAEVIHGSLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHV    400

BSNT_02419___    401 KLATDCGIPEENCFIMDNGEVLALKGDEASVAGKIPSGSVYIDGSGIGDI    450
                     ||||||||||||||||||||||||||:||:||||||||||||||||||||
RBAM_014270__    401 KLATDCGIPEENCFIMDNGEVLALKGEEAAVAGKIPSGSVYIDGSGIGDI    450

BSNT_02419___    451 GNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPDLISRGFVYMRESGDL    500
                     |||||||||||||||||||||||:||||::||||||||||||||||||||
RBAM_014270__    451 GNIVLRDRRILSEEGLVIVVVSINMDDFRVSAGPDLISRGFVYMRESGDL    500

BSNT_02419___    501 INDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPFLYEKTKRRPMILP    550
                     |||||:||||||:|||:|||||||||||||||||||||||||||||||||
RBAM_014270__    501 INDAQQLISNHLEKVMDRKTTQWSEIKNEITDTLAPFLYEKTKRRPMILP    550

BSNT_02419___    551 IIMEV    555
                     |||||
RBAM_014270__    551 IIMEV    555


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