Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02397 and RBAM_014090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence pep-align/BSNT_02397___yknX.1.9828.seq
# -bsequence pep-align/RBAM_014090___yknX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02397___yknX-RBAM_014090___yknX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02397___yknX-RBAM_014090___yknX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02397___yknX
# 2: RBAM_014090___yknX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 283/378 (74.9%)
# Similarity: 345/378 (91.3%)
# Gaps: 1/378 ( 0.3%)
# Score: 1481.0
#
#
#=======================================
BSNT_02397___ 1 MKKVWIGIGIAVIVALFVGINIYRSAAPTSGSAGKEIQTGSVEENEISST 50
|||:|||||||||||:|:|||||:||||..|||||:|:||::|..|||||
RBAM_014090__ 1 MKKIWIGIGIAVIVAVFIGINIYKSAAPAGGSAGKKIETGTMENREISST 50
BSNT_02397___ 51 VMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLVTYTNEQLS 100
||||||||||.|||||||||||||:.:|||||||||||:.|||||||||:
RBAM_014090__ 51 VMVPGTLKFSKEQYVFYEADKGTLDKVKVKEGDKVKKGSSLVTYTNEQLN 100
BSNT_02397___ 101 LEKEQNQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAEKQIESE 150
|:||||:||.:|.|:||:|::|||:||:|||::|.||||:.||:||||||
RBAM_014090__ 101 LDKEQNELTEQSKRMQIEQVEEKLRALNSKEQDLAKQVGEAEAKKQIESE 150
BSNT_02397___ 151 RTELQMQKKTAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQEAA 200
||:||:|:|||||||||::||:|||.|:|::|.||||::|||||||||||
RBAM_014090__ 151 RTDLQLQQKTAEIELKQSDLQKQSLENQVANLNVKSEMDGTVISVNQEAA 200
BSNT_02397___ 201 SKKSDIQEPVIHIGNPKDLVVSGKLSEYDTLKVKKGQKVTLTSDVIQGKT 250
||||||||||||||:|:.|:|:|.|||||||||||||.||:|||.|.|||
RBAM_014090__ 201 SKKSDIQEPVIHIGDPEHLIVAGNLSEYDTLKVKKGQSVTITSDAIPGKT 250
BSNT_02397___ 251 WKGTVSAVGLVPDQQESAAA-QGTEQAVQYPLQVKIKGNLPEGKPGFKFI 299
|||.|:||||||||:.|||: :.||||||||.|||:.|||||||||||.|
RBAM_014090__ 251 WKGRVAAVGLVPDQKSSAASGESTEQAVQYPFQVKLIGNLPEGKPGFKLI 300
BSNT_02397___ 300 MNIETDKRKANTLPSKAVKKEDDQYYVYTVKDGKAKRVNVKIGEVTDDLT 349
||||||||||:||||.||||:.|:::|:||||||||||.||:|:..:.||
RBAM_014090__ 301 MNIETDKRKADTLPSSAVKKDGDEHWVFTVKDGKAKRVKVKVGDTANQLT 350
BSNT_02397___ 350 EIKEGLTQDDQVILNPSDQVTDGMEVKS 377
||||||::||:|||||:|.:|||.:||:
RBAM_014090__ 351 EIKEGLSKDDKVILNPADGLTDGTDVKA 378
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