Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02370 and RBAM_013980

See DNA alignment / Visit BSNT_02370 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02370___ykuT.1.9828.seq
#    -bsequence pep-align/RBAM_013980___ykuT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02370___ykuT-RBAM_013980___ykuT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02370___ykuT-RBAM_013980___ykuT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02370___ykuT
# 2: RBAM_013980___ykuT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     202/269 (75.1%)
# Similarity:   235/269 (87.4%)
# Gaps:           3/269 ( 1.1%)
# Score: 1057.0
# 
#
#=======================================

BSNT_02370___      1 MDFIKQYDWAGLITNAGVLLIKLAIMILLYFIVRSLGMKIIKHLFAKFEE     50
                     |..:|.:|||||:|:||:.:||||::||.|||.|:.|.|:|||||.|||:
RBAM_013980__      1 MIDLKHFDWAGLLTSAGIFIIKLALIILAYFIFRAAGKKLIKHLFQKFEQ     50

BSNT_02370___     51 QNSLSIGRAHTLRSLTLNIFAYTLIFIFFVMVLDLFHYDPSALLAGAGIV    100
                     ||:||.|||:|||||.||::.|.|||:|.||:||||||:||||:||||:|
RBAM_013980__     51 QNNLSTGRAYTLRSLALNVYGYILIFVFIVMILDLFHYNPSALIAGAGVV    100

BSNT_02370___    101 GLAVGFGAQGLVSDIVTGFFILLEKQLDVGDYITVSTFDGIVEQVGLRTT    150
                     ||||||||||||||||||||||||||:||||||||:.:.|||||||||||
RBAM_013980__    101 GLAVGFGAQGLVSDIVTGFFILLEKQIDVGDYITVAGYSGIVEQVGLRTT    150

BSNT_02370___    151 QIRSFDGTLHYIPNRNITNVSNHSRGTMQALVDIKVPAERNIDEMIHILQ    200
                     |||||||||||:|||.|||||||||||||||||||||.|:|:||.|.|||
RBAM_013980__    151 QIRSFDGTLHYLPNRGITNVSNHSRGTMQALVDIKVPLEKNLDETIQILQ    200

BSNT_02370___    201 QVCDETAAALPQIKEGPNVIGIQELGTSEIVIRVIAKTENMEQWRVERVL    250
                     ..||:.|||||||||||:|||:|:|.|||:|||:||||||||||||||||
RBAM_013980__    201 TACDKAAAALPQIKEGPDVIGVQDLSTSEMVIRIIAKTENMEQWRVERVL    250

BSNT_02370___    251 RKEIKNAFDRAFPKETE--    267
                     |:|||.|.|| |.....  
RBAM_013980__    251 RREIKIALDR-FKNAASAE    268


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