Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02362 and RBAM_013920

See DNA alignment / Visit BSNT_02362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02362___ykuN.1.9828.seq
#    -bsequence pep-align/RBAM_013920___ykuN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02362___ykuN-RBAM_013920___ykuN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02362___ykuN-RBAM_013920___ykuN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02362___ykuN
# 2: RBAM_013920___ykuN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     103/158 (65.2%)
# Similarity:   128/158 (81.0%)
# Gaps:           1/158 ( 0.6%)
# Score: 560.0
# 
#
#=======================================

BSNT_02362___      1 MAKALITYASMSGNTEDIAFIIKDTLQEYELDIDCVEIDDMDASCLTSYD     50
                     |.|||:.||||||||||||.|||:||..:::.:||:::|:.||..|.:||
RBAM_013920__      1 MQKALMIYASMSGNTEDIAGIIKETLSGHQIAVDCLDMDEADADSLEAYD     50

BSNT_02362___     51 YVLIGTYTWGDGDLPYEAEDFFEEVKQIQLNGLKTACFGSGDYSYPKFCE    100
                     ||.:|||||||||||||||||:|::...||||||||||||||::||||||
RBAM_013920__     51 YVFVGTYTWGDGDLPYEAEDFYEDILHSQLNGLKTACFGSGDHAYPKFCE    100

BSNT_02362___    101 AVNLFNVMLQEAGAAVYQETLKIELAPETDEDVESCRAFARGFLAWADYM    150
                     ||.||....::|||.:|.|||||||||||.||.|.|:.|.|||||||.: 
RBAM_013920__    101 AVTLFCDAFEQAGANLYPETLKIELAPETAEDQECCKEFVRGFLAWAAH-    149

BSNT_02362___    151 NKEKIHVS    158
                     :.::.|||
RBAM_013920__    150 HGDRCHVS    157


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