Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02347 and RBAM_013800

See DNA alignment / Visit BSNT_02347 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence pep-align/BSNT_02347___cheV.1.9828.seq
#    -bsequence pep-align/RBAM_013800___cheV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02347___cheV-RBAM_013800___cheV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02347___cheV-RBAM_013800___cheV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02347___cheV
# 2: RBAM_013800___cheV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     249/303 (82.2%)
# Similarity:   273/303 (90.1%)
# Gaps:           9/303 ( 3.0%)
# Score: 1285.0
# 
#
#=======================================

BSNT_02347___      1 ---------MDSGTNELEIVKFGVGENAFGINVMKVREIIQPVEVTSVPH     41
                              :||||||||||||.||.|.|||||||||||||||:|||||.
RBAM_013800__      1 MSLQQYDILLDSGTNELEIVKFEVGVNTFGINVMKVREIIQPVDVTSVPQ     50

BSNT_02347___     42 SHQHVEGMIKLRGEILPVISLFSFFGVEPEGSKDEKYIVTEFNKRKIVFH     91
                     ||:.|||||||||||||||||::||||:.|.:||:|||||||||||||||
RBAM_013800__     51 SHKDVEGMIKLRGEILPVISLYTFFGVDAEEAKDDKYIVTEFNKRKIVFH    100

BSNT_02347___     92 VGSVSQIHRVSWEAIEKPTSLNQGMERHLTGIIKLEDLMIFLPDYEKIIY    141
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_013800__    101 VGSVSQIHRVSWEAIEKPTSLNQGMERHLTGIIKLEDTMIFLPDYEKIIY    150

BSNT_02347___    142 DIESDSGVDTYNMHTEGFDERRTDKKLIIVEDSPLLMRLLQDELKEAGYN    191
                     ||||.|||:||::|.|||||||..||||||||||||||||.|||.||||:
RBAM_013800__    151 DIESASGVETYHVHQEGFDERRAGKKLIIVEDSPLLMRLLTDELTEAGYS    200

BSNT_02347___    192 NIASFENGKEAYEYIMNLAENETDLSEQIDMIITDIEMPKMDGHRLTKLL    241
                     .|.:||||||||:|::.|.:|..:||:.|||||:||||||||||||||||
RBAM_013800__    201 EIVTFENGKEAYDYVVELTDNGANLSDHIDMIISDIEMPKMDGHRLTKLL    250

BSNT_02347___    242 KENPKSSDVPVMIFSSLITDDLRHRGEVVGADEQISKPEISDLIKKVDTY    291
                     |:||:|||||:||||||||||||||||||||||||||||||:||||||||
RBAM_013800__    251 KDNPQSSDVPIMIFSSLITDDLRHRGEVVGADEQISKPEISELIKKVDTY    300

BSNT_02347___    292 VIE    294
                     |||
RBAM_013800__    301 VIE    303


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