Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02344 and RBAM_013780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence pep-align/BSNT_02344___patA.1.9828.seq
# -bsequence pep-align/RBAM_013780___patA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02344___patA-RBAM_013780___patA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02344___patA-RBAM_013780___patA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02344___patA
# 2: RBAM_013780___patA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 340/393 (86.5%)
# Similarity: 369/393 (93.9%)
# Gaps: 7/393 ( 1.8%)
# Score: 1762.0
#
#
#=======================================
BSNT_02344___ 1 MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAA 50
:|||..:|||||||||||||||||::|||||||||||||||||||||
RBAM_013780__ 1 ---MLNPNVKEIEISGIRKFSNLVAQHDNVISLTIGQPDFFTPHHVKAAA 47
BSNT_02344___ 51 KKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQ 100
|||||||.|:||||||.||||||||||||||||.||:||:|||:||||||
RBAM_013780__ 48 KKAIDENATAYTPNAGGLELRQAVQLYMKKKADLNYEAETEIIVTTGASQ 97
BSNT_02344___ 101 AIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLT 150
||||:.|||||||||||:||||||||||||.:.||.||.||||:||||||
RBAM_013780__ 98 AIDASLRTILSPGDEVILPGPIYPGYEPIIRMSGAVPVHVDTTTHGFKLT 147
BSNT_02344___ 151 ARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSD 200
|||||::|||.||||:|||||||||||||||||::|||:|||||||||||
RBAM_013780__ 148 ARLIEESLTPKTKCVILPYPSNPTGVTLSEEELQNIAAVLKGRNVFVLSD 197
BSNT_02344___ 201 EIYSELTYDRPHYSIANHLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIA 250
||||||||||||||||::||||||||||||||||||||||||:||||:||
RBAM_013780__ 198 EIYSELTYDRPHYSIASYLRDQTIVINGLSKSHSMTGWRIGFIFAPKEIA 247
BSNT_02344___ 251 KHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDR 300
|||||||||:|:|||||||||||||||||.||||||||||||||||||||
RBAM_013780__ 248 KHILKVHQYSVTCASSISQKAALEAVTNGVDDALIMREQYKKRLDYVYDR 297
BSNT_02344___ 301 LVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFS 350
||||||||||||||||||||||||||:|||||||||||||||||||||||
RBAM_013780__ 298 LVSMGLDVVKPSGAFYIFPSIKSFGMSSFDFSMALLEDAGVALVPGSSFS 347
BSNT_02344___ 351 TYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV 393
..||||||||||.|::||||||||||.|:||.||:||||
RBAM_013780__ 348 KLGEGYVRLSFAYSLNTLREGLDRLEAFILKTRESMQTI---- 386
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