Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02315 and RBAM_013600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence pep-align/BSNT_02315___ykvU.1.9828.seq
# -bsequence pep-align/RBAM_013600___ykvU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02315___ykvU-RBAM_013600___ykvU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02315___ykvU-RBAM_013600___ykvU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02315___ykvU
# 2: RBAM_013600___ykvU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 412/446 (92.4%)
# Similarity: 427/446 (95.7%)
# Gaps: 1/446 ( 0.2%)
# Score: 2083.0
#
#
#=======================================
BSNT_02315___ 1 MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFL 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013600__ 1 MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFL 50
BSNT_02315___ 51 IIVIASLELPISISKFIAESNPKLHESMLRHAFRMTAIFTAFSTAAASIA 100
|||||||||||||||||||||.|||||||||||||||:||||||||||||
RBAM_013600__ 51 IIVIASLELPISISKFIAESNQKLHESMLRHAFRMTAVFTAFSTAAASIA 100
BSNT_02315___ 101 LPFIPVFDTYHPFIKGIVIGLIPVVAFTSIARGYFMGVQKMGKIAIANVL 150
|||||||||||||||||||||||||||||||||||||||:|||||:|||:
RBAM_013600__ 101 LPFIPVFDTYHPFIKGIVIGLIPVVAFTSIARGYFMGVQQMGKIAVANVM 150
BSNT_02315___ 151 KKIIQLLCLFLFFQWYSFELDMAVLISLFVLVVSDVVVLVYLYSQFIMAR 200
|||||:||||:||||||||:||||||||||||.|||||.||||:|||:||
RBAM_013600__ 151 KKIIQVLCLFIFFQWYSFEIDMAVLISLFVLVASDVVVFVYLYTQFILAR 200
BSNT_02315___ 201 RALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAIEPFLVKGALL 250
|||||.||||||||||||||||||||||||||||||.|||||||||||||
RBAM_013600__ 201 RALSGHQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVTNAIEPFLVKGALL 250
BSNT_02315___ 251 AAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQ 300
|:|.||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_013600__ 251 ASGAAGTAAIDQYGMLAGVAMTIGSFPAFIAHSLMVVMIPSISEAYALSQ 300
BSNT_02315___ 301 YDIVLKRLKQSIFITLGYGIPAVWVMFQFAGPLTHLFFHSPEAQYYLQLL 350
||||||||:|:||||.||||||||||||||||||||||.|||||||||||
RBAM_013600__ 301 YDIVLKRLRQAIFITFGYGIPAVWVMFQFAGPLTHLFFQSPEAQYYLQLL 350
BSNT_02315___ 351 WPYFLFHLFVMPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENL 400
||:||||||||||||||||:|.||.||||||||.||.||||||||||..|
RBAM_013600__ 351 WPFFLFHLFVMPLQACLIGIGHVKTAFYHNVWSSIVGLSMMYVLGSMPEL 400
BSNT_02315___ 401 QMLGIILGMNTGMILLTSLHYATICKALKVSVFLTGGTRT-PRIEG 445
||||||||||||||||||||||||||.|.||||||||.|| ||||.
RBAM_013600__ 401 QMLGIILGMNTGMILLTSLHYATICKDLGVSVFLTGGGRTAPRIES 446
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