Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02267 and RBAM_013240

See DNA alignment / Visit BSNT_02267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_02267___sspD.1.9828.seq
#    -bsequence pep-align/RBAM_013240___sspD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02267___sspD-RBAM_013240___sspD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02267___sspD-RBAM_013240___sspD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02267___sspD
# 2: RBAM_013240___sspD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      56/64 (87.5%)
# Similarity:    58/64 (90.6%)
# Gaps:           0/64 ( 0.0%)
# Score: 276.0
# 
#
#=======================================

BSNT_02267___      1 MASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKR     50
                     |||||||:|||.||||||||.||||||||||.|||.||||||||||||||
RBAM_013240__      1 MASRNKLLVPGAEQALDQFKYEVAQEFGVNLSSDTAARANGSVGGEMTKR     50

BSNT_02267___     51 LVQQAQSQLNGTTK     64
                     |||||||||||..:
RBAM_013240__     51 LVQQAQSQLNGKNQ     64


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