Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02187 and RBAM_012820

See DNA alignment / Visit BSNT_02187 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_02187.1.9828.seq
#    -bsequence pep-align/RBAM_012820___ykfA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02187-RBAM_012820___ykfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02187-RBAM_012820___ykfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02187
# 2: RBAM_012820___ykfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     245/314 (78.0%)
# Similarity:   275/314 (87.6%)
# Gaps:           4/314 ( 1.3%)
# Score: 1292.0
# 
#
#=======================================

BSNT_02187         1 MNYKPKALKKGDTVGVIAPASPPDQKKLDTALLFLE-ELGLQVKLGKALK     49
                     ||:|||||:||||||||||||||:...|.||||||| |||||||||:|||
RBAM_012820__      1 MNHKPKALQKGDTVGVIAPASPPESGTLQTALLFLENELGLQVKLGRALK     50

BSNT_02187        50 NQHGYLAGQDDERLADLHEMFRDEEVKAVLCACGGFGTGRIAAGIDFSLI     99
                     .:||||||:|..||.|||:||.|:.||||:|||||||||||||.|||.||
RBAM_012820__     51 TRHGYLAGEDRARLDDLHDMFSDQNVKAVICACGGFGTGRIAADIDFGLI    100

BSNT_02187       100 RKHPKIFWGYSDITFLHTAIHQNTGLVTFHGPMLSSDIGLDDVHPLTKAS    149
                     |::||||||||||||||||||||||||||||||||:|:||:|..||||||
RBAM_012820__    101 RRNPKIFWGYSDITFLHTAIHQNTGLVTFHGPMLSTDVGLEDADPLTKAS    150

BSNT_02187       150 YKQLFQETEFTYTEELSPLTALVPGKAEGELVGGNLSLLTSTLGTPFEID    199
                     |:|||.||||||||::|||..|..|:|||||.||||||:|||||||||||
RBAM_012820__    151 YRQLFTETEFTYTEDISPLEVLTGGRAEGELAGGNLSLITSTLGTPFEID    200

BSNT_02187       200 TRGKLLFIEDIDEEPYQIDRMLNQLKMAGKLTDAAGILVCDFHNCVPVKR    249
                     |:.||||||||||||||||||||||||||||:|||||||||||.|.|..:
RBAM_012820__    201 TKDKLLFIEDIDEEPYQIDRMLNQLKMAGKLSDAAGILVCDFHQCEPKHK    250

BSNT_02187       250 EKSLSLEQVLEDYIISAGRPALRGFKIGHCSPSIAVPIGAKAAMNTAEKT    299
                     ||||:|||||.|||:.:|:|||:||||||||||.||||||:|.|:||.|.
RBAM_012820__    251 EKSLTLEQVLNDYIVKSGKPALKGFKIGHCSPSFAVPIGARAVMDTAAKA    300

BSNT_02187       300 VVIEAGVSEGALKT    313
                     |.||:|||...   
RBAM_012820__    301 VTIESGVSGRE---    311


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