Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02179 and RBAM_012750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence pep-align/BSNT_02179___htrA.1.9828.seq
# -bsequence pep-align/RBAM_012750___htrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02179___htrA-RBAM_012750___htrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02179___htrA-RBAM_012750___htrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02179___htrA
# 2: RBAM_012750___htrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 363/459 (79.1%)
# Similarity: 399/459 (86.9%)
# Gaps: 18/459 ( 3.9%)
# Score: 1774.0
#
#
#=======================================
BSNT_02179___ 1 MMDNYRDENRTKGNENEVFLTKENDQSASYSARNVIHDQEKKKRGFGWFR 50
|||||||||||...|.||.|.|||.|.|.||| .|::||||.|||||
RBAM_012750__ 1 MMDNYRDENRTDQKEQEVLLVKENPQPAGYSA----PDEDKKKRSFGWFR 46
BSNT_02179___ 51 PLLGGVIGGSLALGIYTFTPLGDHDSQDTAKQSSSQQQTQSVTATSTSSE 100
|||||||||.||||||||||||||.:|||:..:.: |:|.||||..||||
RBAM_012750__ 47 PLLGGVIGGGLALGIYTFTPLGDHQTQDTSNPAPA-QETSSVTAKQTSSE 95
BSNT_02179___ 101 SK--KSSSSSSAFKSEDSSKISDMVEDLSPAIVGITNLQ-AQSNSSLFG- 146
|. ||::|||| :||.||:||||:||||||||||| .||:|.|||
RBAM_012750__ 96 SDSGKSANSSSA----NSSSISNMVEDISPAIVGITNLQKQQSSSDLFGF 141
BSNT_02179___ 147 -----SSSSDSSEDTESGSGSGVIFKKENGKAYIITNNHVVEGASSLKVS 191
|:|:.|.:|.|:||||||||||.||||||||||||||||||||||
RBAM_012750__ 142 GSSSDSNSNSSGDDAETGSGSGVIFKKANGKAYIITNNHVVEGASSLKVS 191
BSNT_02179___ 192 LYDGTEVTAKLVGSDSLTDLAVLQISDDHVTKVANFGDSSDLRTGETVIA 241
|:|||:|||||||||||||||||:|||.||||.|:||.||.|||||:|||
RBAM_012750__ 192 LFDGTDVTAKLVGSDSLTDLAVLEISDKHVTKTASFGSSSALRTGESVIA 241
BSNT_02179___ 242 IGDPLGKDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNS 291
||||||||||||||||||||::||||:||||||:||||||||||||||||
RBAM_012750__ 242 IGDPLGKDLSRTVTQGIVSGLNRTVSISTSAGESSINVIQTDAAINPGNS 291
BSNT_02179___ 292 GGPLLNTDGKIVGINSMKISEDDVEGIGFAIPSNDVKPIAEELLSKGQIE 341
|||||||||||:|||||||||.||||||||||||||||||||||:|||:|
RBAM_012750__ 292 GGPLLNTDGKIIGINSMKISESDVEGIGFAIPSNDVKPIAEELLTKGQVE 341
BSNT_02179___ 342 RPYIGVSMLDLEQVPQNYQEGTLGLFGSQLNKGVYIREVASGSPAEKAGL 391
||||||||:||||||||||||||||||.||||||||||||.||||.||||
RBAM_012750__ 342 RPYIGVSMIDLEQVPQNYQEGTLGLFGKQLNKGVYIREVAQGSPAAKAGL 391
BSNT_02179___ 392 KAEDIIIGLKGKEIDTGSELRNILYKDAKIGETVEVKILRNGKEMTKKIK 441
|||||||.|||||..|||||||||||:.|:|.||:|||:|||||||||:|
RBAM_012750__ 392 KAEDIIISLKGKETGTGSELRNILYKNTKVGSTVDVKIIRNGKEMTKKMK 441
BSNT_02179___ 442 LDQKEEKTS 450
|.||||.:|
RBAM_012750__ 442 LTQKEETSS 450
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