Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02179 and RBAM_012750

See DNA alignment / Visit BSNT_02179 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_02179___htrA.1.9828.seq
#    -bsequence pep-align/RBAM_012750___htrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02179___htrA-RBAM_012750___htrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02179___htrA-RBAM_012750___htrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02179___htrA
# 2: RBAM_012750___htrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity:     363/459 (79.1%)
# Similarity:   399/459 (86.9%)
# Gaps:          18/459 ( 3.9%)
# Score: 1774.0
# 
#
#=======================================

BSNT_02179___      1 MMDNYRDENRTKGNENEVFLTKENDQSASYSARNVIHDQEKKKRGFGWFR     50
                     |||||||||||...|.||.|.|||.|.|.|||    .|::||||.|||||
RBAM_012750__      1 MMDNYRDENRTDQKEQEVLLVKENPQPAGYSA----PDEDKKKRSFGWFR     46

BSNT_02179___     51 PLLGGVIGGSLALGIYTFTPLGDHDSQDTAKQSSSQQQTQSVTATSTSSE    100
                     |||||||||.||||||||||||||.:|||:..:.: |:|.||||..||||
RBAM_012750__     47 PLLGGVIGGGLALGIYTFTPLGDHQTQDTSNPAPA-QETSSVTAKQTSSE     95

BSNT_02179___    101 SK--KSSSSSSAFKSEDSSKISDMVEDLSPAIVGITNLQ-AQSNSSLFG-    146
                     |.  ||::||||    :||.||:||||:||||||||||| .||:|.||| 
RBAM_012750__     96 SDSGKSANSSSA----NSSSISNMVEDISPAIVGITNLQKQQSSSDLFGF    141

BSNT_02179___    147 -----SSSSDSSEDTESGSGSGVIFKKENGKAYIITNNHVVEGASSLKVS    191
                          |:|:.|.:|.|:||||||||||.||||||||||||||||||||||
RBAM_012750__    142 GSSSDSNSNSSGDDAETGSGSGVIFKKANGKAYIITNNHVVEGASSLKVS    191

BSNT_02179___    192 LYDGTEVTAKLVGSDSLTDLAVLQISDDHVTKVANFGDSSDLRTGETVIA    241
                     |:|||:|||||||||||||||||:|||.||||.|:||.||.|||||:|||
RBAM_012750__    192 LFDGTDVTAKLVGSDSLTDLAVLEISDKHVTKTASFGSSSALRTGESVIA    241

BSNT_02179___    242 IGDPLGKDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNS    291
                     ||||||||||||||||||||::||||:||||||:||||||||||||||||
RBAM_012750__    242 IGDPLGKDLSRTVTQGIVSGLNRTVSISTSAGESSINVIQTDAAINPGNS    291

BSNT_02179___    292 GGPLLNTDGKIVGINSMKISEDDVEGIGFAIPSNDVKPIAEELLSKGQIE    341
                     |||||||||||:|||||||||.||||||||||||||||||||||:|||:|
RBAM_012750__    292 GGPLLNTDGKIIGINSMKISESDVEGIGFAIPSNDVKPIAEELLTKGQVE    341

BSNT_02179___    342 RPYIGVSMLDLEQVPQNYQEGTLGLFGSQLNKGVYIREVASGSPAEKAGL    391
                     ||||||||:||||||||||||||||||.||||||||||||.||||.||||
RBAM_012750__    342 RPYIGVSMIDLEQVPQNYQEGTLGLFGKQLNKGVYIREVAQGSPAAKAGL    391

BSNT_02179___    392 KAEDIIIGLKGKEIDTGSELRNILYKDAKIGETVEVKILRNGKEMTKKIK    441
                     |||||||.|||||..|||||||||||:.|:|.||:|||:|||||||||:|
RBAM_012750__    392 KAEDIIISLKGKETGTGSELRNILYKNTKVGSTVDVKIIRNGKEMTKKMK    441

BSNT_02179___    442 LDQKEEKTS    450
                     |.||||.:|
RBAM_012750__    442 LTQKEETSS    450


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