Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02177 and RBAM_012730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_02177___ykcB.1.9828.seq
# -bsequence pep-align/RBAM_012730___ykcB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02177___ykcB-RBAM_012730___ykcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02177___ykcB-RBAM_012730___ykcB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02177___ykcB
# 2: RBAM_012730___ykcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity: 617/720 (85.7%)
# Similarity: 666/720 (92.5%)
# Gaps: 11/720 ( 1.5%)
# Score: 3228.0
#
#
#=======================================
BSNT_02177___ 1 MEKKKRELDIFLILILLASAFLNIYNIWNDDTVNPYYTAAVTSMMQSFHN 50
|:.||||:|..||:|||||||||:||||||||||||||||||||:|||||
RBAM_012730__ 1 MKMKKREIDAVLIVILLASAFLNMYNIWNDDTVNPYYTAAVTSMLQSFHN 50
BSNT_02177___ 51 FFYASFDAAGFITVDKPPITFQIQTISALIFGMHGWSVILPQALAGVGSV 100
||||||||||||||||||:|:|:|||||||||||||||||||||||||||
RBAM_012730__ 51 FFYASFDAAGFITVDKPPVTYQVQTISALIFGMHGWSVILPQALAGVGSV 100
BSNT_02177___ 101 LLMYLLIKPTFGKTAARIASFIMACTPIAVAVARTNNVDALLVFFLLLAT 150
|.|||||||||||||||||||:|||||||||||||||||||||||||.||
RBAM_012730__ 101 LFMYLLIKPTFGKTAARIASFVMACTPIAVAVARTNNVDALLVFFLLFAT 150
BSNT_02177___ 151 WLLFKAIRKGKLIWLLAAFFVVGVGFNTKMLQAYMILPAFLLFYLIAANA 200
||||||||||:||||||||||||.||||||||||||||||||||:||||.
RBAM_012730__ 151 WLLFKAIRKGRLIWLLAAFFVVGAGFNTKMLQAYMILPAFLLFYMIAANT 200
BSNT_02177___ 201 TIKKKIVSLVSALAVLAAVSLSWPLIVDNIPASKRPYIGSSQTNSVLELA 250
||||||:||||||||||||||||||||||||||||||:||||||||||||
RBAM_012730__ 201 TIKKKIISLVSALAVLAAVSLSWPLIVDNIPASKRPYVGSSQTNSVLELA 250
BSNT_02177___ 251 FGYNGIQRLTGQNSGGGQGAPNKDASKEMSSSDNT---QAPPNQSSSNSS 297
||||||||||||:||||||.|:.:|||||||||.: |.||.||||:||
RBAM_012730__ 251 FGYNGIQRLTGQSSGGGQGGPDGNASKEMSSSDGSSQMQKPPGQSSSSSS 300
BSNT_02177___ 298 SSDGKSSNGNMAAPPSNGQMPSGGQGGPPSGGDGGQGGPGGDGGKGGTGT 347
:|..|..||:|.||||||:|||||||||||||||| |||.|.||
RBAM_012730__ 301 ASGDKPQNGSMTAPPSNGKMPSGGQGGPPSGGDGG-------GGKSGAGT 343
BSNT_02177___ 348 GSKMQSGSGMFGTGTPGPLRLFQQELSDQISWLLPFAIFGIAGLLIAGAR 397
|||||||||||||||||||||||.||||||||||||||||:|||||||||
RBAM_012730__ 344 GSKMQSGSGMFGTGTPGPLRLFQTELSDQISWLLPFAIFGMAGLLIAGAR 393
BSNT_02177___ 398 ERRRLSIEQKETVFWVAWLVPIAGFFSVAEFFHHYYLIMLAPPIAALVGA 447
||||||.|||||:||.||||||||||||||||||||||||||||||||||
RBAM_012730__ 394 ERRRLSAEQKETIFWAAWLVPIAGFFSVAEFFHHYYLIMLAPPIAALVGA 443
BSNT_02177___ 448 GWVALVHLYRNQTGWKAWLLPGAIIATTGFELFILRNYNDQIGAGWSIGV 497
||||||||||.|.|||.||||.||:.|||||||||||||||||||||||.
RBAM_012730__ 444 GWVALVHLYRKQAGWKTWLLPAAILVTTGFELFILRNYNDQIGAGWSIGA 493
BSNT_02177___ 498 GVIGVLSAIALLLFKQRQKPFSYYVSLAALLALLVMPIYWASTPLLYGGN 547
||:|.::||||.:|||||||.|||||||||..|:||||||||||||||||
RBAM_012730__ 494 GVLGAVAAIALFVFKQRQKPLSYYVSLAALFVLMVMPIYWASTPLLYGGN 543
BSNT_02177___ 548 SSLPETGPQLASMSGKGMGMSDATVNEKLIKYLEENNSGAEYLFATTDSN 597
||||||||||||.|||||||.:::||.|||.|||::|.||:|||||||||
RBAM_012730__ 544 SSLPETGPQLASTSGKGMGMDNSSVNTKLINYLEKHNDGADYLFATTDSN 593
BSNT_02177___ 598 TAAPYIIKTKKAVMAIGGYSGSDPAITLTQFKKLVKEGKVKYFLASGMGR 647
||||||||||||||||||:|||||||||||||||||||||||||.||||:
RBAM_012730__ 594 TAAPYIIKTKKAVMAIGGFSGSDPAITLTQFKKLVKEGKVKYFLTSGMGK 643
BSNT_02177___ 648 GGNNDIVEWVEKNGKEVASEKWQSSSDQKTENTDSADTSSSKASGENGKM 697
|||||||:|||||||:|:|:|||||:||||:|:|.|||.||||:|:|.:|
RBAM_012730__ 644 GGNNDIVQWVEKNGKKVSSDKWQSSTDQKTKNSDPADTKSSKAAGKNSRM 693
BSNT_02177___ 698 -GGPGGMNQSATLYELHADE 716
||||||||||:||||.:||
RBAM_012730__ 694 SGGPGGMNQSASLYELQSDE 713
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