Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02167 and RBAM_012660

See DNA alignment / Visit BSNT_02167 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02167___xlyA.1.9828.seq
#    -bsequence pep-align/RBAM_012660___xlyA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02167___xlyA-RBAM_012660___xlyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02167___xlyA-RBAM_012660___xlyA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02167___xlyA
# 2: RBAM_012660___xlyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     234/297 (78.8%)
# Similarity:   257/297 (86.5%)
# Gaps:           5/297 ( 1.7%)
# Score: 1262.5
# 
#
#=======================================

BSNT_02167___      1 MVNIIQDFIPVGANNRPGYAMTPLYITVHNTANTAVGADAAAHARYLKNP     50
                     ||.|.|||||.|.||||||||||:||||||||||||||:|.:||.|:|||
RBAM_012660__      1 MVKITQDFIPAGNNNRPGYAMTPIYITVHNTANTAVGANAKSHASYVKNP     50

BSNT_02167___     51 DTTTSWHFTVDDTEIYQHLPLNENGWHAGDGNGSGNRASIGIEICENADG    100
                     ||.||||||||||||||||||||||||||||||.|||.||||||||||||
RBAM_012660__     51 DTPTSWHFTVDDTEIYQHLPLNENGWHAGDGNGDGNRKSIGIEICENADG    100

BSNT_02167___    101 DFAKATANAQWLIKTLMAEHNISLANVVPHKYWSGKECPRKLLDTWDSFK    150
                     :|::|.|||||||:|||..|.|.|||||.||:||||.|||:||||||.||
RBAM_012660__    101 NFSQAVANAQWLIRTLMTSHGIPLANVVAHKHWSGKLCPRRLLDTWDEFK    150

BSNT_02167___    151 AGIGGGGSQTYVVKQGDTLTSIARAFGVTVAQLQEWNNIEDPNLIRVGQV    200
                     ||||.|..|||.|::||||::|||.|||:||.||:||||.|||||:||||
RBAM_012660__    151 AGIGSGERQTYTVQKGDTLSAIARKFGVSVADLQKWNNIADPNLIKVGQV    200

BSNT_02167___    201 LIVSAPSSAEEPELYPLPDGIIQLTTPYTSGEHVFQVQRALAALYFYPDK    250
                     ||||.|..|    ||.|||.:||||.||||||.|:|||.|||||||||:|
RBAM_012660__    201 LIVSPPVEA----LYSLPDEVIQLTEPYTSGEKVYQVQNALAALYFYPEK    246

BSNT_02167___    251 GAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGPATKAKIAAQLS    297
                     |||||||||:|||||||||||||||||||:||:||||.||||..|| 
RBAM_012660__    247 GAVNNGIDGIYGPKTADAVARFQSVNGLTSDGVYGPAVKAKILMQL-    292


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