Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02164 and RBAM_012630

See DNA alignment / Visit BSNT_02164 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02164___xepA.1.9828.seq
#    -bsequence pep-align/RBAM_012630___xepA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02164___xepA-RBAM_012630___xepA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02164___xepA-RBAM_012630___xepA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02164___xepA
# 2: RBAM_012630___xepA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     156/279 (55.9%)
# Similarity:   196/279 (70.3%)
# Gaps:          26/279 ( 9.3%)
# Score: 802.0
# 
#
#=======================================

BSNT_02164___      1 MVKYQYEFPLDRTGKAGAVKPYRGGKNDFVTPVSNLSGVAEILTNASLKA     50
                     |.|:.:|||:|:.|:.||||.|||.|||:||||::|||:||:|||..|:|
RBAM_012630__      1 MKKHSFEFPVDQLGRPGAVKAYRGNKNDYVTPVADLSGMAELLTNTPLEA     50

BSNT_02164___     51 TEAYSQLGQDRLGAVLISKVKGWAYADREGTLFIEESDNNNVWTTTAAVN    100
                     .|.|||.||.|||||.|.:|:||||:||.||||||||::||.||.:.:|.
RBAM_012630__     51 IEVYSQFGQHRLGAVFIDRVQGWAYSDRSGTLFIEESEDNNSWTASHSVA    100

BSNT_02164___    101 VAAGVLTATDWVYLSKRYYRFRYVNGNLQQSEFVLYQSVGAGEMDVRVNG    150
                     |..|||||:.||.|:|||||||:.|||.:|||||||||||.|.       
RBAM_012630__    101 VKGGVLTASGWVCLTKRYYRFRFENGNQKQSEFVLYQSVGTGG-------    143

BSNT_02164___    151 KTPLQIDFADNQTHDGRLKVEARKTFDFVFHENAESAGEGAALPVDGAAH    200
                           |.|.:.|             |.:|||||..||||:.........
RBAM_012630__    144 ------DMAFSYT-------------DVIFHENAAEAGEGSIFSAGAWKK    174

BSNT_02164___    201 LLVEVYGTAEMSEVKFWGKSVSGQKLPIRGVKTDDATTASSTLGKAEAWA    250
                     ||||:.||||...|.|||:|:||:.:||||::::|.|:|:.|.|..|.|:
RBAM_012630__    175 LLVEITGTAESGHVAFWGRSISGKNVPIRGIRSEDGTSAAGTSGTDEVWS    224

BSNT_02164___    251 FDIKGFKEIIMEIISITGGTLSVKGTAVS    279
                     |||.|||||:|||.||:||:|||||||.|
RBAM_012630__    225 FDIAGFKEIVMEIQSISGGSLSVKGTAFS    253


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