Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02125 and RBAM_012570

See DNA alignment / Visit BSNT_02125 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02125___xtrA.1.9828.seq
#    -bsequence pep-align/RBAM_012570___xtrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02125___xtrA-RBAM_012570___xtrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02125___xtrA-RBAM_012570___xtrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02125___xtrA
# 2: RBAM_012570___xtrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 68
# Identity:      52/68 (76.5%)
# Similarity:    62/68 (91.2%)
# Gaps:           1/68 ( 1.5%)
# Score: 278.0
# 
#
#=======================================

BSNT_02125___      1 MIHPKKLLHIDSITLKSQLEEGKIRVIIVDGIKQEAWITEAPEHGKTLVE     50
                      ::||||..|:..||:|||||||:|||||||:|:|||:.|||||||||||
RBAM_012570__      1 -MNPKKLTDIEHTTLQSQLEEGKVRVIIVDGLKKEAWLAEAPEHGKTLVE     49

BSNT_02125___     51 TRKGDLARVEFEIGYKLN     68
                     ||||||||||:|||:|||
RBAM_012570__     50 TRKGDLARVEYEIGFKLN     67


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