Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02120 and RBAM_012540

See DNA alignment / Visit BSNT_02120 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_02120.1.9828.seq
#    -bsequence pep-align/RBAM_012540___xkdC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02120-RBAM_012540___xkdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02120-RBAM_012540___xkdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02120
# 2: RBAM_012540___xkdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     153/266 (57.5%)
# Similarity:   180/266 (67.7%)
# Gaps:          59/266 (22.2%)
# Score: 822.0
# 
#
#=======================================

BSNT_02120         0 --------------------------------------------------      0
                                                                       
RBAM_012540__      1 MTKRTIEQILADLKNGKRPLLADRPEESDESRFDCPLCKDQGGYLKNQLG     50

BSNT_02120         1 ---------MAERKVKRLLGASEITHAFRQLGFKEFRTEGKPQAIKDAFE     41
                              .||||.:|:|.|||||.|||:|.||.|.|.|||||:.||:|
RBAM_012540__     51 LDVWVKCRCAAERKAERILSASEITGAFRKLDFKGFITRGKPQAVVDAYE    100

BSNT_02120        42 CIKEYVADYEQIKDCRKNSIALLGQPGSGKTHLLTAAANELMRTCYVPVI     91
                     |..|||.::::||:||||||||||:|||||||||||.:|.:||....||:
RBAM_012540__    101 CALEYVENFDKIKNCRKNSIALLGRPGSGKTHLLTALSNYVMRQMQTPVL    150

BSNT_02120        92 YFPFVEGFTDLKNDFALLEAKLNRMKQADVLFIDDLFKPVNGKPRATDWQ    141
                     |||||||||||||||.||:.||.||||||||||||||||:||||||||||
RBAM_012540__    151 YFPFVEGFTDLKNDFDLLDEKLGRMKQADVLFIDDLFKPLNGKPRATDWQ    200

BSNT_02120       142 LEQMYSVLNYRYLNHKPILLSSELTIEALVRVDEALGTRIYEMCSDYLVI    191
                     :||||:|:|||||||||:|:||||..:.||:|||||||||||||||||||
RBAM_012540__    201 IEQMYAVVNYRYLNHKPVLISSELACDGLVQVDEALGTRIYEMCSDYLVI    250

BSNT_02120       192 IKGAAYELNHRLEGVR    207
                     |.|.::::||||||.|
RBAM_012540__    251 INGNSFDVNHRLEGAR    266


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