Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02075 and RBAM_012310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02075___yjjA.1.9828.seq
# -bsequence pep-align/RBAM_012310___hemD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02075___yjjA-RBAM_012310___hemD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02075___yjjA-RBAM_012310___hemD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02075___yjjA
# 2: RBAM_012310___hemD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity: 193/272 (71.0%)
# Similarity: 229/272 (84.2%)
# Gaps: 2/272 ( 0.7%)
# Score: 1009.0
#
#
#=======================================
BSNT_02075___ 1 MGKGLLGKRVAIGGSRKTEEISTIIEKQGGIPVIRPLQGTVYLAEKQVEP 50
|||||.|||:|||||||||||:.:||||||..|:|.|||||||||.|:||
RBAM_012310__ 1 MGKGLNGKRIAIGGSRKTEEITRLIEKQGGTAVVRSLQGTVYLAEDQIEP 50
BSNT_02075___ 51 DLRTFAEEKADWVIFTTGIGLETLVDMAEKIGLKDEFLQAIRQAKAACRG 100
|:||||.:||||||||||||.|||:.::||||||:|||.|:.:||..|||
RBAM_012310__ 51 DVRTFAGQKADWVIFTTGIGTETLLSVSEKIGLKEEFLAAVHEAKIGCRG 100
BSNT_02075___ 101 YKTLSALKKLGITPEASDEDGTTRGLIRSLEPHDFSGKTVMVQLHGEKAP 150
|||.:|||||||||.||||||||||||||||..||..|.||:||||||||
RBAM_012310__ 101 YKTYAALKKLGITPHASDEDGTTRGLIRSLERFDFKDKKVMIQLHGEKAP 150
BSNT_02075___ 151 ALMAFLEEKGASVLPILPYQHIPPEEETVEQLCRELMNDEVDAVCFTTAI 200
.|..|||:.||.|.|:||||||.||.|||::|..||:|.|||||||||||
RBAM_012310__ 151 VLTQFLEKNGAEVFPVLPYQHILPERETVDKLLGELLNGEVDAVCFTTAI 200
BSNT_02075___ 201 QVRSLFDFAKGRGYINEVKKVFEERAIAAAVGKVTAEALREEGITRLLAP 250
|||||||:||.:|...|:::.||::.:|||||||||||:|:||:.|:|||
RBAM_012310__ 201 QVRSLFDYAKEKGSTKELQQAFEKQVLAAAVGKVTAEAIRDEGVKRVLAP 250
BSNT_02075___ 251 EIERMGAMIVELAKYYEEKE-- 270
:||||||||:||::|||...
RBAM_012310__ 251 DIERMGAMIIELSRYYESLTLS 272
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