Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02070 and RBAM_012290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02070___yjiB.1.9828.seq
# -bsequence pep-align/RBAM_012290___yjiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02070___yjiB-RBAM_012290___yjiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02070___yjiB-RBAM_012290___yjiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02070___yjiB
# 2: RBAM_012290___yjiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity: 254/405 (62.7%)
# Similarity: 313/405 (77.3%)
# Gaps: 9/405 ( 2.2%)
# Score: 1369.0
#
#
#=======================================
BSNT_02070___ 1 -MNVLNRRQALQRALLNGKNKQDAYHPFPWYESMRKDAPVSFDEENQVWS 49
..:.:.|||:||.|:.|||..|.|:||||||.||:::|:.||||.:|||
RBAM_012290__ 1 MSKLRSTRQAIQRTLMKGKNGLDVYNPFPWYEKMRRESPIHFDEETKVWS 50
BSNT_02070___ 50 VFLYDDVKKVVGDKELFSSCMPQQTSSIGNSIINMDPPKHTKIRSVVNKA 99
||||||||||:.|||.|||.|....|||..|::||||||||:|||.||:|
RBAM_012290__ 51 VFLYDDVKKVISDKETFSSLMTDVKSSIAKSMLNMDPPKHTQIRSAVNRA 100
BSNT_02070___ 100 FTPRVMKQWEPRIQEITDELIQKCQGRSEFDLVHDFSYPLPVIVISELLG 149
|||||:|:|||||::|||.|:::.:.:...|:|.|.||||||:|||||||
RBAM_012290__ 101 FTPRVLKEWEPRIKDITDHLLKQAKNKGRIDIVKDLSYPLPVMVISELLG 150
BSNT_02070___ 150 VPSAHMEQFKAWSDLLVSTPKDKSEEAEKAFLEERDKCEEELAAFFAGII 199
|||..|:|||.|||:|||.|||.|.||.:...:|||:||.|||||||.||
RBAM_012290__ 151 VPSERMDQFKKWSDILVSMPKDASPEAAEKNQQERDQCEAELAAFFAEII 200
BSNT_02070___ 200 EEKRNKPEQDIISILVEAEETGEKLSGEELIPFCTLLLVAGNETTTNLIS 249
|.||.:|.|||||||::.||.||||:.|:|||||.|||||||||||||||
RBAM_012290__ 201 ESKRKQPGQDIISILIKEEEEGEKLTAEDLIPFCNLLLVAGNETTTNLIS 250
BSNT_02070___ 250 NAMYSILETPGVYEELRSHPELMPQAVEEALRFRAPAPVLRRIAKRDTEI 299
||:||||||||:|||||..|.|:.|.|||.||||||||.:||..:.|||:
RBAM_012290__ 251 NAVYSILETPGLYEELRQDPSLIAQTVEETLRFRAPAPFVRRTVRHDTEL 300
BSNT_02070___ 300 GGHLIKEGDMVLAFVASANRDEAKFDRPHMFDIRRHPNPHIAFGHGIHFC 349
.|..:|.|::||.:||||||||.||::..:|||.|..|||::||.|:|||
RBAM_012290__ 301 RGRRLKSGEIVLCYVASANRDENKFEKAGVFDIHRQSNPHLSFGFGVHFC 350
BSNT_02070___ 350 LGAPLARLEANIALTSLISAFPHMECVSITPIENSVIYGLKSFRVKI--- 396
||||||||||.:||..::.||.|:|.|.|.||.|||:|||:|...:|
RBAM_012290__ 351 LGAPLARLEAEVALKGIVKAFSHLEPVRIEPIRNSVMYGLESLEAEINEN 400
BSNT_02070___ 396 ----- 396
RBAM_012290__ 401 EGEEK 405
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