Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01982 and RBAM_011940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_01982___yjcJ.1.9828.seq
# -bsequence pep-align/RBAM_011940___yjcJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01982___yjcJ-RBAM_011940___yjcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01982___yjcJ-RBAM_011940___yjcJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01982___yjcJ
# 2: RBAM_011940___yjcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity: 348/391 (89.0%)
# Similarity: 368/391 (94.1%)
# Gaps: 1/391 ( 0.3%)
# Score: 1796.0
#
#
#=======================================
BSNT_01982___ 1 MSKHNWTLETQLVHNPFKTDGGTGAVSVPIQHASTFHQSSFEEFGAYDYS 50
||.||||||||||||||||||.|||||||||||||||||||||||.||||
RBAM_011940__ 1 MSNHNWTLETQLVHNPFKTDGATGAVSVPIQHASTFHQSSFEEFGTYDYS 50
BSNT_01982___ 51 RSGTPTRTALEETIAALEGGTRGFAFSSGMAAISTAFLLLSQGDHVLVTE 100
|||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_011940__ 51 RSGTPTRTALEETIAGLEGGTRGFAFSSGMAAISTAFLLLSQGDHVLVTE 100
BSNT_01982___ 101 DVYGGTFRMVTEVLTRFGIEHTFVDMTDRNEVARSIKPNTKVIYMETPSN 150
||||||||||||||:|||||||||||||...|||:|:||||.||||||||
RBAM_011940__ 101 DVYGGTFRMVTEVLSRFGIEHTFVDMTDTEAVARAIRPNTKAIYMETPSN 150
BSNT_01982___ 151 PTLGITDIKAIVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATK 200
|||||||||.:|:|||::||||:|||||||||||||||||||||||||||
RBAM_011940__ 151 PTLGITDIKGVVKLAKDHGCLTYLDNTFMTPALQRPLDLGVDIVLHSATK 200
BSNT_01982___ 201 FLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTL 250
|||||||||||||||||||||.|||||||:||||||||||||||||||||
RBAM_011940__ 201 FLSGHSDVLSGLAAVKDEELGNQLYKLQNSFGAVLGVQDCWLVLRGLKTL 250
BSNT_01982___ 251 QVRLEKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGA 300
||||||||:||:||:.:|..|||:|.|||||||.||||:|||.|::||||
RBAM_011940__ 251 QVRLEKASRTAERLSAYFDGHPAIKNVYYPGLAGHPGADTHKRQASGAGA 300
BSNT_01982___ 301 VLSFELESKEAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEE 350
|||||||||||||||||||||||||||||||||||||||.||||||||.|
RBAM_011940__ 301 VLSFELESKEAVKKLVENVSLPVFAVSLGAVESILSYPAAMSHAAMPKAE 350
BSNT_01982___ 351 REKRGITDGLLRLSVGVEHADDLEHDFEQALKEIAPVAVR- 390
||||||||||||||||||:|:|||.|||||||:|.|..||
RBAM_011940__ 351 REKRGITDGLLRLSVGVENAEDLERDFEQALKKITPAQVRS 391
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