Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01897 and RBAM_011320

See DNA alignment / Visit BSNT_01897 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence pep-align/BSNT_01897___yjzB.1.9828.seq
#    -bsequence pep-align/RBAM_011320___yjzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01897___yjzB-RBAM_011320___yjzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01897___yjzB-RBAM_011320___yjzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01897___yjzB
# 2: RBAM_011320___yjzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      43/73 (58.9%)
# Similarity:    57/73 (78.1%)
# Gaps:           1/73 ( 1.4%)
# Score: 223.0
# 
#
#=======================================

BSNT_01897___      1 MDVFSRMMFGDAAKPTEEKEEQQEEVSQTNDEKTINYMHIMDQIGSIMNS     50
                     ||:||:|||||:....:|.||..|: .|..:|:.|:|.|:|:|:||||||
RBAM_011320__      1 MDIFSKMMFGDSRDRDKEPEENPEQ-PQAENEEEIDYNHVMNQLGSIMNS     49

BSNT_01897___     51 LDQIKPALKELAPMLSAIKKKIM     73
                     |||:||..|:.|||:||||||||
RBAM_011320__     50 LDQLKPVFKDFAPMVSAIKKKIM     72


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