Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01888 and RBAM_011260

See DNA alignment / Visit BSNT_01888 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_01888___yjzC.1.9828.seq
#    -bsequence pep-align/RBAM_011260___yjzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01888___yjzC-RBAM_011260___yjzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01888___yjzC-RBAM_011260___yjzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01888___yjzC
# 2: RBAM_011260___yjzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 59
# Identity:      54/59 (91.5%)
# Similarity:    57/59 (96.6%)
# Gaps:           0/59 ( 0.0%)
# Score: 304.0
# 
#
#=======================================

BSNT_01888___      1 MGQQHQFRPGQKAPNNGVYVEIGETGSMVKNPQKVHLSAGEMFPETSNHN     50
                     ||||||||||||||||||||||||||||||||||:.|:.|||||||||||
RBAM_011260__      1 MGQQHQFRPGQKAPNNGVYVEIGETGSMVKNPQKIKLTVGEMFPETSNHN     50

BSNT_01888___     51 RLWTYKRKP     59
                     |||||:|||
RBAM_011260__     51 RLWTYQRKP     59


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