Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01884 and RBAM_011240

See DNA alignment / Visit BSNT_01884 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_01884___carB.1.9828.seq
#    -bsequence pep-align/RBAM_011240___carB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01884___carB-RBAM_011240___carB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01884___carB-RBAM_011240___carB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01884___carB
# 2: RBAM_011240___carB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1031
# Identity:     864/1031 (83.8%)
# Similarity:   948/1031 (91.9%)
# Gaps:           1/1031 ( 0.1%)
# Score: 4448.0
# 
#
#=======================================

BSNT_01884___      1 MPKDTSISSILVIGSGPIIIGQAAEFDYSGTQGCIALKEEGYRVILVNSN     50
                     |||||:||||||||||||||||||||||||||||:|||||||||||||:|
RBAM_011240__      1 MPKDTTISSILVIGSGPIIIGQAAEFDYSGTQGCMALKEEGYRVILVNNN     50

BSNT_01884___     51 PATIMTDEAFADEIYFEPLTAESLTAIIKKEQPDGLLANLGGQTALNLAV    100
                     ||||||||||||||||||||.:|:.|||:||:||||||||||||||||||
RBAM_011240__     51 PATIMTDEAFADEIYFEPLTTDSIEAIIEKEKPDGLLANLGGQTALNLAV    100

BSNT_01884___    101 ELEETGVLKEHGVKLLGTSVETIQKGEDREKFRSLMNELNQPVPESEIVD    150
                     :|||.||||:|.||||||||||||||||||:||:||.||:||||||||||
RBAM_011240__    101 KLEEAGVLKKHHVKLLGTSVETIQKGEDREQFRALMKELDQPVPESEIVD    150

BSNT_01884___    151 NETDAIRFAESIGFPVIIRPAYTLGGKGGGIAPDKEAFTAMIKQALLASP    200
                     ||.||:|||||||||||:||||||||||||||..||||..:|||||||||
RBAM_011240__    151 NEEDALRFAESIGFPVILRPAYTLGGKGGGIAKTKEAFQTLIKQALLASP    200

BSNT_01884___    201 INQCLVEKSIAGFKEIEYEVMRDSNNTCITVCNMENIDPVGVHTGDSIVV    250
                     |:|||||||||||||||||||||||:||||||||||||||||||||||||
RBAM_011240__    201 ISQCLVEKSIAGFKEIEYEVMRDSNHTCITVCNMENIDPVGVHTGDSIVV    250

BSNT_01884___    251 APSQTLTDEDYQMLRTASLTIISALDVVGGCNIQFALDPFSKQYYVIEVN    300
                     |||||||||:|||||:|||.||||||||||||||||:|||||||||||||
RBAM_011240__    251 APSQTLTDEEYQMLRSASLAIISALDVVGGCNIQFAMDPFSKQYYVIEVN    300

BSNT_01884___    301 PRVSRSSALASKATGYPIAKMAAKLAVGYTLDELKNPLTGSTYASFEPAL    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_011240__    301 PRVSRSSALASKATGYPIAKMAAKLAVGYTLDELKNPLTGSTYASFEPAL    350

BSNT_01884___    351 DYVIVKFPRWPFDKFKNADRKLGTKMKATGEVMAIERNLEAAIQKAAASL    400
                     ||||||||||||||||:|||.|||||||||||||||||:|||||||||||
RBAM_011240__    351 DYVIVKFPRWPFDKFKHADRTLGTKMKATGEVMAIERNMEAAIQKAAASL    400

BSNT_01884___    401 ELKNIGTHLPELSGLSIDTLWDLAITPDDRRFFVVMELLSRSVSIDDIHE    450
                     |||.|||.||||.|.:|:.||:||:||||||||||||||||..:|:|||.
RBAM_011240__    401 ELKTIGTRLPELGGCTINQLWELAVTPDDRRFFVVMELLSRGETIEDIHA    450

BSNT_01884___    451 KTKIDPFFLHTFDNIIKLENRLMEAGSDLSFELLKKAKEKGFSDATIASL    500
                     ||||||||||.|.|||.|||:|||.|..|||.|||:||.|||:|..||||
RBAM_011240__    451 KTKIDPFFLHVFRNIITLENKLMEEGDHLSFPLLKQAKVKGFTDVMIASL    500

BSNT_01884___    501 IGKTEEEVRALRKEMGITPSFKIVDTCAAEFDAKTNYFYSTYFGETDGDI    550
                     .|||||::|||||:.||.||||||||||||||||||||||||.||:||||
RBAM_011240__    501 TGKTEEDIRALRKKSGIVPSFKIVDTCAAEFDAKTNYFYSTYLGESDGDI    550

BSNT_01884___    551 SRKEKKRALIIGSGPIRIGQGVEFDNSAVHGVLTLQELGFETIMINNNPE    600
                     |||||||||||||||||||||||||.||||||||||:||:||||||||||
RBAM_011240__    551 SRKEKKRALIIGSGPIRIGQGVEFDYSAVHGVLTLQKLGYETIMINNNPE    600

BSNT_01884___    601 TVSTDYEIADRLYFEPMTTEHIVNVAEQENIDFAIVQFGGQTAINAAEAL    650
                     ||||||||||||||||:|||||:||||.||||||||||||||||||||.|
RBAM_011240__    601 TVSTDYEIADRLYFEPLTTEHILNVAEHENIDFAIVQFGGQTAINAAEPL    650

BSNT_01884___    651 EKAGITLLGTSFQTLDVLEDRDQFYQLLDELGLKHAKGEIAYTKEEAASK    700
                     |||||.||||||:|||.|||||.||||||:|.|||||||.||:||||..|
RBAM_011240__    651 EKAGIPLLGTSFETLDALEDRDLFYQLLDDLDLKHAKGETAYSKEEATEK    700

BSNT_01884___    701 ASEIGYPVLIRPSYVIGGMGMIIVDSQAQLSQLLNDEDSMPYPILIDQYV    750
                     ||.|||||||||||||||||||||||:||:|:||.:|..||||||||||:
RBAM_011240__    701 ASRIGYPVLIRPSYVIGGMGMIIVDSEAQMSELLENEAGMPYPILIDQYI    750

BSNT_01884___    751 SGKEVEIDLISDGEDVFIPTYTEHIERAGVHSGDSFAILPGPSITSGLQQ    800
                     :|||:||||||||.:||:|||||||||||||||||||||||||:|..:|:
RBAM_011240__    751 TGKELEIDLISDGHEVFVPTYTEHIERAGVHSGDSFAILPGPSVTPDMQR    800

BSNT_01884___    801 GMKDAAQKIARKLSFKGIMNIQFVIDN-GNILVLEVNPRASRTVPVVSKV    849
                     .:|:||:|||.||:||||||||||||: |:||||||||||||||||||||
RBAM_011240__    801 NIKEAAEKIAVKLAFKGIMNIQFVIDDKGDILVLEVNPRASRTVPVVSKV    850

BSNT_01884___    850 MGVPMIPLATRLLAGASLKDLDPAVQNHHGVAVKFPVFSSHAIQDVDIKL    899
                     |||||||||.||||||||||:.|.|||.||.||||||||||||||||:|.
RBAM_011240__    851 MGVPMIPLAARLLAGASLKDIKPEVQNQHGTAVKFPVFSSHAIQDVDVKP    900

BSNT_01884___    900 GPEMKSTGEGMCVAYDSNSALKKIYTRVWSQKGSIYLQNVPEDVQELAEN    949
                     ||||||||||||||:|:.|||||||..||.:||||||:....:::..|:.
RBAM_011240__    901 GPEMKSTGEGMCVAFDAESALKKIYAHVWEKKGSIYLEGCDAELERQAQE    950

BSNT_01884___    950 AGFTVHEGTFASWMEQEEKSLHINLSGSEEARIERLEAMTHGIPVFTEEE    999
                     |||||.:..|.:|.|:::|::|||.:.|||||.:|:||||||:.||||.|
RBAM_011240__    951 AGFTVCKDAFPAWAERKDKAVHINFNHSEEARKQRIEAMTHGVTVFTEPE   1000

BSNT_01884___   1000 TVRAFLQSGSGHPQPVSLKDLYKKEVASCTQ   1030
                     ||:|||.||||.|:||||||||:||||||||
RBAM_011240__   1001 TVKAFLASGSGKPEPVSLKDLYQKEVASCTQ   1031


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01884 and RBAM_011240

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
