Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01881 and RBAM_011210

See DNA alignment / Visit BSNT_01881 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_01881___argB.1.9828.seq
#    -bsequence pep-align/RBAM_011210___argB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01881___argB-RBAM_011210___argB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01881___argB-RBAM_011210___argB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01881___argB
# 2: RBAM_011210___argB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     195/258 (75.6%)
# Similarity:   225/258 (87.2%)
# Gaps:           0/258 ( 0.0%)
# Score: 988.0
# 
#
#=======================================

BSNT_01881___      1 MKKTIVFKCGGSVIRELSEEFFQNLKELMASGWKLAIVHGGGPEITNMLK     50
                     ||||||||||||||||||.:||||:||||.|||.:|:||||||:|:.|||
RBAM_011210__      1 MKKTIVFKCGGSVIRELSADFFQNVKELMQSGWNIAVVHGGGPDISKMLK     50

BSNT_01881___     51 RLNIKTEFSGGQRKTTKPVLEVAEMVLSGSVNKFFVAELAKHGLRAAGIS    100
                     .|.|:|||..|||||||||||.|||||||::|||||.||||:||:|||||
RBAM_011210__     51 TLQIETEFVDGQRKTTKPVLETAEMVLSGTINKFFVTELAKNGLKAAGIS    100

BSNT_01881___    101 GKDGGLLEADYLDPETHGEVGEIKKVDASMVNALMENGIIPVIAPLSMTS    150
                     |||||||:|.||:.:.:||||||:|.|.|:::|||:.|||||||||||||
RBAM_011210__    101 GKDGGLLQASYLNQDKYGEVGEIQKTDPSIIHALMKEGIIPVIAPLSMTS    150

BSNT_01881___    151 DCKTLNVNADLAASAVAGALEADKLMFVTDVDGIMKEKQRLDVLTPKEIQ    200
                     |.:|||||||.||||||.||.||||:|||||:|||..:.|||.|||:|||
RBAM_011210__    151 DFETLNVNADAAASAVASALHADKLLFVTDVEGIMDGESRLDTLTPQEIQ    200

BSNT_01881___    201 MLIKQEVITGGMIPKVNSALSALSDQVSEVMIVNGKGSFFAEQTFQGTKI    250
                     .||...||:|||||||||||||||:.|.|||||||||:||.:|.||||||
RBAM_011210__    201 ALIDDGVISGGMIPKVNSALSALSEDVEEVMIVNGKGAFFTDQAFQGTKI    250

BSNT_01881___    251 VKAKEAVS    258
                     ||.||:||
RBAM_011210__    251 VKEKESVS    258


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