Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01860 and RBAM_011020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence pep-align/BSNT_01860___yitJ.1.9828.seq
# -bsequence pep-align/RBAM_011020___yitJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01860___yitJ-RBAM_011020___yitJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01860___yitJ-RBAM_011020___yitJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01860___yitJ
# 2: RBAM_011020___yitJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 613
# Identity: 534/613 (87.1%)
# Similarity: 583/613 (95.1%)
# Gaps: 1/613 ( 0.2%)
# Score: 2770.0
#
#
#=======================================
BSNT_01860___ 1 MGLLEDLQRQVLIGDGAMGTLLYSYGIDRCFEELNISKPEEIQRIHKAYV 50
||||:||:.::||||||||||||||||||||||||:||||||:|||||||
RBAM_011020__ 1 MGLLQDLKERILIGDGAMGTLLYSYGIDRCFEELNVSKPEEIKRIHKAYV 50
BSNT_01860___ 51 EAGANIIQTNTYGANYIKLSRHGLEDDIKKMNQEAVKIARASAGDAYVLG 100
||||:||||||||||:|||||:||||:.||:|||||:|||||:..|||||
RBAM_011020__ 51 EAGADIIQTNTYGANFIKLSRYGLEDETKKINQEAVRIARASSDGAYVLG 100
BSNT_01860___ 101 TMGGIRTFNKNAYSLDEIKRSFREQLYLLLHEEPDGLLLETYYDLEEARE 150
|||||||||||||||:||||||||||||||||||||||||||||||||||
RBAM_011020__ 101 TMGGIRTFNKNAYSLEEIKRSFREQLYLLLHEEPDGLLLETYYDLEEARE 150
BSNT_01860___ 151 VLKIARKETDLPIMLNVSMHEQGVLQDGTPLSDALRSIADLGADIVGINC 200
|||||||||:|||||||||||||||||||||.:||||||||||||.||||
RBAM_011020__ 151 VLKIARKETELPIMLNVSMHEQGVLQDGTPLWEALRSIADLGADIAGINC 200
BSNT_01860___ 201 RLGPYHMIEALSEVPIFDDVFLSVYPNSSLPSLEEGRLVYETDDTYFQNS 250
|||||||||||:|||||.|.:|||||||||||||||||||:|||.||:.|
RBAM_011020__ 201 RLGPYHMIEALTEVPIFRDAYLSVYPNSSLPSLEEGRLVYDTDDAYFRES 250
BSNT_01860___ 251 ASEFRKQGARIIGGCCGTTPNHIRAMAEAVGGLVPIKEKEVK-TRAKEFI 299
|.:||.||||||||||||||||||||||||.||.|:.||||| .|.:|.|
RBAM_011020__ 251 AVQFRTQGARIIGGCCGTTPNHIRAMAEAVRGLSPVTEKEVKIRREEEVI 300
BSNT_01860___ 300 SVHHERTEPGLDEIAAKKRSIIVELDPPKKLSFDKFLSAAAELKEAGIDA 349
||.:|||||||:||||:||||||||||||||:|||||.|||||||.||:|
RBAM_011020__ 301 SVSNERTEPGLNEIAAQKRSIIVELDPPKKLNFDKFLQAAAELKETGIEA 350
BSNT_01860___ 350 LTLADNSLATPRISNVACGALIKQQLDMRSLVHITCRDRNIIGLQSHLMG 399
|||||||||||||||.|||:|:|::||:||||||||||||||||||||||
RBAM_011020__ 351 LTLADNSLATPRISNAACGSLLKERLDIRSLVHITCRDRNIIGLQSHLMG 400
BSNT_01860___ 400 LDTLGLNDVLAITGDPSKIGDFPGATSVYDLTSFDLIRLIKQFNEGLSLS 449
||||||.|:|||||||||||||||||||||||||||||||||||||:|||
RBAM_011020__ 401 LDTLGLTDILAITGDPSKIGDFPGATSVYDLTSFDLIRLIKQFNEGISLS 450
BSNT_01860___ 450 GKPLGKKTNFSVAAAFNPNVRHLDKAVKRLEKKIDCGADYFVSQPVYSEQ 499
|||||||||||||.||||||||||||||||||||:|||||||||||||||
RBAM_011020__ 451 GKPLGKKTNFSVAGAFNPNVRHLDKAVKRLEKKIECGADYFVSQPVYSEQ 500
BSNT_01860___ 500 QLVDIHNEIKHLKTPIYIGIMPLTSSRNAEFIHNEIPGIKLSDTIREKMA 549
||:|||:|.||||||:|||||||||||||||||:|||||||||:||||||
RBAM_011020__ 501 QLIDIHHETKHLKTPVYIGIMPLTSSRNAEFIHHEIPGIKLSDSIREKMA 550
BSNT_01860___ 550 RAGEDKEKQKAEGLAIARSLLDTACELFNGIYLITPFLRSDLTAELTSYI 599
.|||||.||||||||||:|||||||||||||||||||||||||:||.:||
RBAM_011020__ 551 LAGEDKRKQKAEGLAIAKSLLDTACELFNGIYLITPFLRSDLTSELAAYI 600
BSNT_01860___ 600 QQKDEQRQNIFLH 612
:||||:|.:::||
RBAM_011020__ 601 KQKDEKRADVYLH 613
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