Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01854 and RBAM_011000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence pep-align/BSNT_01854___yisX.1.9828.seq
# -bsequence pep-align/RBAM_011000___yisX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01854___yisX-RBAM_011000___yisX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01854___yisX-RBAM_011000___yisX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01854___yisX
# 2: RBAM_011000___yisX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 119/212 (56.1%)
# Similarity: 162/212 (76.4%)
# Gaps: 4/212 ( 1.9%)
# Score: 633.5
#
#
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BSNT_01854___ 1 MNKIAIQKPNIPENLQTADFHDAVTQDDVISMHLFEDCTICGEDIERLCV 50
|| .||||.||:.|....|.:|: |||:|...:.|:..:.|: ::.|..
RBAM_011000__ 1 MN--TIQKPKIPKELPVLSFTEAL-QDDLIKEVVIENAVVSGK-LDGLRA 46
BSNT_01854___ 51 EKTVFRNVVFIDVSFRHIELTDVIFEKCDLSNADFSGAVIHRTSVKQSKM 100
||.:|||.||.||||||:|.|||:|:|||:|||||||::||||:.:.||:
RBAM_011000__ 47 EKVIFRNTVFTDVSFRHMECTDVLFDKCDVSNADFSGSIIHRTAFQHSKL 96
BSNT_01854___ 101 VGMNVAEATLRNVSFEECHGHFSSFSYSNMKQVRFDHCALMQSECSNTVL 150
:|:|:|::.:|:|.||:|..::|||||||||.||||.|||.:||.::.||
RBAM_011000__ 97 LGLNLADSAMRHVRFEDCLANYSSFSYSNMKHVRFDTCALTESEWNDAVL 146
BSNT_01854___ 151 QQTHFDGCELEGASFTGTSLQNMDISTCRFEQLHVSLDKLKGCKIAPEHA 200
:.|..|.|:|.||:|.||||.|||||||.|:.|||||:|||||:|:|.||
RBAM_011000__ 147 EYTDLDVCDLNGANFIGTSLFNMDISTCTFDHLHVSLEKLKGCRISPAHA 196
BSNT_01854___ 201 IAFARALGAVIV 212
:.||.||||::.
RBAM_011000__ 197 VTFAEALGAIVT 208
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