Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01844 and RBAM_010980

See DNA alignment / Visit BSNT_01844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence pep-align/BSNT_01844___yisR.1.9828.seq
#    -bsequence pep-align/RBAM_010980___yisR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01844___yisR-RBAM_010980___yisR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01844___yisR-RBAM_010980___yisR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01844___yisR
# 2: RBAM_010980___yisR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     229/287 (79.8%)
# Similarity:   254/287 (88.5%)
# Gaps:           0/287 ( 0.0%)
# Score: 1204.0
# 
#
#=======================================

BSNT_01844___      1 MPRILFTVPPFPVFIAAGEGVFKKGETHVKRVFSVFDLIYVKQGTLYITE     50
                     |..:.||||||||||||||||||||||||:|||.||||:|||:|.|||||
RBAM_010980__      1 MSFLEFTVPPFPVFIAAGEGVFKKGETHVRRVFPVFDLLYVKEGVLYITE     50

BSNT_01844___     51 NETSFSVEGGEYILLSPGLEHYGTKGSDEATSYYWLHFDEHRYEFTAKGG    100
                     :|.:||||.||||||||||||||||||:|.|||.||||:...||.....|
RBAM_010980__     51 DENAFSVEAGEYILLSPGLEHYGTKGSEETTSYSWLHFEGADYEMAETTG    100

BSNT_01844___    101 SNWSELQQEKGSFEEPARYGLALPRKGKVQRPQFMAQQFEKLIDYSAENS    150
                     :|||.|:::|||||||:||.|:||:||||:||||||.||..|.|.|||||
RBAM_010980__    101 NNWSGLRRKKGSFEEPSRYRLSLPQKGKVRRPQFMAGQFSVLTDDSAENS    150

BSNT_01844___    151 DLPLRKQILFAELMLHLQKEAFQIPSAKERVAWEAARYLQEHYKEKTTIK    200
                     ||||||||||.||:|||||||||||||||||||||||||||||:||||||
RBAM_010980__    151 DLPLRKQILFEELLLHLQKEAFQIPSAKERVAWEAARYLQEHYQEKTTIK    200

BSNT_01844___    201 DLSLALHYHQDYVSRCMQQVLGVTPAQYTNRVRMTEAKRLLSSTNDKMGV    250
                     .||.||||:||||:|||||||||||.||||:|||||||||||:||||||.
RBAM_010980__    201 ALSSALHYNQDYVTRCMQQVLGVTPGQYTNKVRMTEAKRLLSATNDKMGA    250

BSNT_01844___    251 IAETVGMEDPTYFSKLFKQIEGISPIEYRKIVSRKVQ    287
                     ||:.:||||||||||||||||||||:||||.||||..
RBAM_010980__    251 IADAIGMEDPTYFSKLFKQIEGISPLEYRKFVSRKTD    287


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