Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01775 and RBAM_010680

See DNA alignment / Visit BSNT_01775 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_01775___yhjC.1.9828.seq
#    -bsequence pep-align/RBAM_010680___yhjC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01775___yhjC-RBAM_010680___yhjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01775___yhjC-RBAM_010680___yhjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01775___yhjC
# 2: RBAM_010680___yhjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      55/66 (83.3%)
# Similarity:    59/66 (89.4%)
# Gaps:           0/66 ( 0.0%)
# Score: 283.0
# 
#
#=======================================

BSNT_01775___      1 MKLIHVLAALPFIGILLGIPFANKVTPYVFGMPFILAYIVMWALLTSALM     50
                     ||||||||||||.|||.||||||:||||||||||||||:|:||:|||.||
RBAM_010680__      1 MKLIHVLAALPFFGILAGIPFANRVTPYVFGMPFILAYVVIWAVLTSVLM     50

BSNT_01775___     51 AIVYVLDKENKKEEAE     66
                     |.||.||||||..|||
RBAM_010680__     51 AAVYKLDKENKAGEAE     66


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.