Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01772 and RBAM_010650

See DNA alignment / Visit BSNT_01772 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_01772___yhjA.1.9828.seq
#    -bsequence pep-align/RBAM_010650___yhjA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01772___yhjA-RBAM_010650___yhjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01772___yhjA-RBAM_010650___yhjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01772___yhjA
# 2: RBAM_010650___yhjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      69/89 (77.5%)
# Similarity:    75/89 (84.3%)
# Gaps:           0/89 ( 0.0%)
# Score: 359.0
# 
#
#=======================================

BSNT_01772___      1 MKKAVAVLLSLGLVFGFSYGADHVAEAKTKVKVYKNCKELNKVYKGGVAR     50
                     |||..|||||.|||||.||||...||||||||.|:|||.||||||||||:
RBAM_010650__      1 MKKTAAVLLSFGLVFGCSYGAGQTAEAKTKVKTYQNCKALNKVYKGGVAK     50

BSNT_01772___     51 TSKAKNKGGKTKYKPYVSKDLYDANKNKDRDKDLIACER     89
                     :||.|||||:|||||||||.||:|||..|||||.||||:
RBAM_010650__     51 SSKVKNKGGRTKYKPYVSKALYNANKRLDRDKDYIACEK     89


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