Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01755 and RBAM_010510

See DNA alignment / Visit BSNT_01755 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:27
# Commandline: needle
#    -asequence pep-align/BSNT_01755.1.9828.seq
#    -bsequence pep-align/RBAM_010510___yhfQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01755-RBAM_010510___yhfQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01755-RBAM_010510___yhfQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01755
# 2: RBAM_010510___yhfQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     147/317 (46.4%)
# Similarity:   186/317 (58.7%)
# Gaps:          63/317 (19.9%)
# Score: 696.0
# 
#
#=======================================

BSNT_01755         1 ------------------------------------MPEHPKRVVVLELG     14
                                                         :..||:||.||..|
RBAM_010510__      1 MKQIFSMLMILSVLFITACSEQEHETAVRHDLGTAHVAAHPQRVAVLNPG     50

BSNT_01755        15 FIDTLLDLGITPVGVADDNKAKQLINKDVLKKIDGYTSVGTRSQPSMQKI     64
                     |.|.|.||||.||..||:...:.          ||..|||..|.|.::||
RBAM_010510__     51 FNDILHDLGIKPVAAADNRTERN----------DGSPSVGPPSHPDLKKI     90

BSNT_01755        65 ASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNLNADYQDTIDASLTIAK    114
                     .||||||||||::.||.:|.||.||||||||.|..|||||.:||:|||.|
RBAM_010510__     91 TSLKPDLIIADSSLHKGIYRQLTKIAPTIALKNEAADYQDAVDAALTIEK    140

BSNT_01755       115 AVGKEKEMEKKLMAHEEKLSETKQKISANSQSVLLIGNTNDTIMARDENF    164
                     ||||:..:||:|.|.||||::.|:|:.|...::|||...||:|..:|:.|
RBAM_010510__    141 AVGKDGIIEKQLSAQEEKLNDIKRKLDAEGGTILLIDAANDSISVKDDQF    190

BSNT_01755       165 FTSRLLTQVGYRYAISTSGNSDSSNGGDSVNMKMTLEQLLKTDPDVIILM    214
                     |||||||..|:.||:.|      .:||.|.::|||..|||.||||.|:|:
RBAM_010510__    191 FTSRLLTLAGFTYAVQT------DSGGKSDSIKMTSGQLLHTDPDYIVLL    234

BSNT_01755       215 TGKTDDLDADVKRPIEKNVLWKKLKAVKNGHVYHVDRAVWSLRRSVDGAN    264
                     .|         ::.:|||.|||:|.||||||||..|||||:.|||:|||:
RBAM_010510__    235 DG---------EKELEKNHLWKQLTAVKNGHVYRADRAVWTERRSIDGAD    275

BSNT_01755       265 AILDELQKEMPAAKK--    279
                     |||.:|||:|.|.|.  
RBAM_010510__    276 AILHDLQKKMLAKKAQN    292


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