Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01701 and RBAM_010200

See DNA alignment / Visit BSNT_01701 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence pep-align/BSNT_01701.1.9828.seq
#    -bsequence pep-align/RBAM_010200.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01701-RBAM_010200.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01701-RBAM_010200.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01701
# 2: RBAM_010200
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 72
# Identity:      51/72 (70.8%)
# Similarity:    54/72 (75.0%)
# Gaps:          18/72 (25.0%)
# Score: 251.0
# 
#
#=======================================

BSNT_01701         1 ------------------MAAVFILYFINRLTNTLCLVREIPEERQDKVF     32
                                       :||:|||||||||||||||||||||:||||||
RBAM_010200        1 MGAVQREGESPIILFYFIVAALFILYFINRLTNTLCLVREIPEDRQDKVF     50

BSNT_01701        33 RFINVSILILLISSFVEISFTV     54
                     ||||||||||||||||||||||
RBAM_010200       51 RFINVSILILLISSFVEISFTV     72


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