Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01678 and RBAM_010040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_01678.1.9828.seq
# -bsequence pep-align/RBAM_010040___yhaZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01678-RBAM_010040___yhaZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01678-RBAM_010040___yhaZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01678
# 2: RBAM_010040___yhaZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 121/357 (33.9%)
# Similarity: 149/357 (41.7%)
# Gaps: 165/357 (46.2%)
# Score: 631.0
#
#
#=======================================
BSNT_01678 0 -------------------------------------------------- 0
RBAM_010040__ 1 MSLLKDIYNEEFAEALLNRIKSAYPAFERDKCRALMFQEDWPGLTLKQRM 50
BSNT_01678 0 -------------------------------------------------- 0
RBAM_010040__ 51 RRITDSLYETLPKDYIRALDVLYETAPHFSGLAGIIFPDYVQQYGTDHWD 100
BSNT_01678 0 -------------------------------------------------- 0
RBAM_010040__ 101 ESMKALQYFTRFSTSEFAVRPYIRLDRERMFKEFLSWTEHPDEHVRRLAS 150
BSNT_01678 1 ---------------MKSDPSPVLPILEKLMQDESLYVRKSVANNLNDIS 35
:..||||:||:|::||||:||||||||||||||||
RBAM_010040__ 151 EGSRPRLPWGISIPALLDDPSPILPVLDRLMQDDSLYVRKSVANNLNDIS 200
BSNT_01678 36 KTHPHLLRKVADQWYGTHPHTDWIIKHAYRTLLKKGDKQALALFGYENAD 85
||||.||.::|.:.:|:.||||||:|||.|||||:|||||||:||:|:|.
RBAM_010040__ 201 KTHPDLLAQIAAERFGSCPHTDWILKHACRTLLKRGDKQALAVFGFEDAS 250
BSNT_01678 86 SIQLHDLTCQPKRIVIGESLEFSFSIHSDRDQKVRIEYAIDFVKARGQRH 135
.|.|...|...:...||.|:.|||.|.|...||||:||||||||.||.|.
RBAM_010040__ 251 RISLERFTLNSETAAIGTSIHFSFQIRSSARQKVRVEYAIDFVKKRGHRS 300
BSNT_01678 136 QKVFKITETTMRKNETKSHTRIQSFKDLTTRKHYKGIHTLSVIINGEVKD 185
:||||::|:.|...:.|:.::..|.|||||||||:|||||||||||.||.
RBAM_010040__ 301 RKVFKMSESAMDNGDVKAFSKHHSLKDLTTRKHYRGIHTLSVIINGTVKG 350
BSNT_01678 186 SLDFQVC 192
||||.|.
RBAM_010040__ 351 SLDFSVE 357
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