Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01677 and RBAM_010030

See DNA alignment / Visit BSNT_01677 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_01677___yheA.1.9828.seq
#    -bsequence pep-align/RBAM_010030___yheA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01677___yheA-RBAM_010030___yheA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01677___yheA-RBAM_010030___yheA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01677___yheA
# 2: RBAM_010030___yheA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      98/117 (83.8%)
# Similarity:   109/117 (93.2%)
# Gaps:           1/117 ( 0.9%)
# Score: 493.0
# 
#
#=======================================

BSNT_01677___      1 MAVNFYDVAYDLENALRGSEEFTRLKNLYDEVNADESAKRMFENFRDVQL     50
                     |||:|||.|||||.|||.|:|::||:.|||:|||||||||||:|||:|||
RBAM_010030__      1 MAVHFYDAAYDLEKALRNSDEYSRLRGLYDQVNADESAKRMFDNFRNVQL     50

BSNT_01677___     51 RLQQKQMAGEEITQEEVTQAQKTVALVQQHEKISQLMEAEQRMSMLIGEL    100
                     :||||||:|||||||||.|||||||||||||.||||||||||||||||||
RBAM_010030__     51 QLQQKQMSGEEITQEEVEQAQKTVALVQQHELISQLMEAEQRMSMLIGEL    100

BSNT_01677___    101 NKIIMKPLEELYGSVEG    117
                     ||||||||||||||.: 
RBAM_010030__    101 NKIIMKPLEELYGSQQ-    116


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