Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01676 and RBAM_010020

See DNA alignment / Visit BSNT_01676 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence pep-align/BSNT_01676___yheB.1.9828.seq
#    -bsequence pep-align/RBAM_010020___yheB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01676___yheB-RBAM_010020___yheB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01676___yheB-RBAM_010020___yheB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01676___yheB
# 2: RBAM_010020___yheB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity:     279/377 (74.0%)
# Similarity:   319/377 (84.6%)
# Gaps:           0/377 ( 0.0%)
# Score: 1432.0
# 
#
#=======================================

BSNT_01676___      1 MGIAGTFIFMIVIGAAIGAVTNHLAIQMLFRPYKAYYLFGKRVPFTPGLI     50
                     |||||||:|||||||||||||||||||||||||:.|||||||||||||||
RBAM_010020__      1 MGIAGTFLFMIVIGAAIGAVTNHLAIQMLFRPYRPYYLFGKRVPFTPGLI     50

BSNT_01676___     51 PRRRDELAKQMGLMVVNHLLTPEGIKKRLVSDAAKTQALRVGEQLIQKLS    100
                     |:|||||||||||||.|||||||||||||:||..|.|||...||..||::
RBAM_010020__     51 PKRRDELAKQMGLMVTNHLLTPEGIKKRLLSDTVKNQALLFAEQFTQKMA    100

BSNT_01676___    101 LSEVTVKEALEKAGMKRPEKAADAWISSWTDDKLNELFRQYGHQSLKELV    150
                     .||:||.|||..||:..|::..||||..:||:||:||:|:|.|:::|:.:
RBAM_010020__    101 ASEMTVHEALAAAGILNPQEKTDAWIDRFTDEKLSELYRKYEHRAIKDWL    150

BSNT_01676___    151 PIEVQEKLEEKIPMISGYILSRSVRYFESDEGKIRLGNMIDDFLKERGML    200
                     |.|:||||:||:|:.:.|||.||..||||:|||.||||||||||..||||
RBAM_010020__    151 PDELQEKLDEKVPLAADYILKRSTDYFESEEGKDRLGNMIDDFLNSRGML    200

BSNT_01676___    201 GSMVQMFLGNSSLADRVLPELLKFLRNEETNKLLSDLLKNEWGKLREYTF    250
                     ||||||||||||||||||||||||||||||.|||:|||..|||||:.||.
RBAM_010020__    201 GSMVQMFLGNSSLADRVLPELLKFLRNEETKKLLADLLSQEWGKLKSYTL    250

BSNT_01676___    251 NEADEKWNAKALIFSLKRRVLQAFSTAPFFDNTIGTLTVRYESELTQQML    300
                     .|||||||||.|:||:|:|.|.|..|||||:..:|.:..|||.|:|....
RBAM_010020__    251 YEADEKWNAKDLLFSMKKRALAALQTAPFFECRLGDIISRYEGEITGTYA    300

BSNT_01676___    301 PALLDKLLEGISSNLESVLKRLRLEEIVKEQVDQFPVERLEEMVLSISKK    350
                     |.|||..|..|:::||.|||||||||:||||||||||||||||||||||:
RBAM_010020__    301 PKLLDAALGSIAAHLEDVLKRLRLEEVVKEQVDQFPVERLEEMVLSISKR    350

BSNT_01676___    351 EFKMITYLGGLLGGIIGAIQALFVILF    377
                     |||||||||||||||||||||||||||
RBAM_010020__    351 EFKMITYLGGLLGGIIGAIQALFVILF    377


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