Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01642 and RBAM_009790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:18
# Commandline: needle
# -asequence pep-align/BSNT_01642.1.9828.seq
# -bsequence pep-align/RBAM_009790___cueR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01642-RBAM_009790___cueR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01642-RBAM_009790___cueR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01642
# 2: RBAM_009790___cueR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 117/181 (64.6%)
# Similarity: 126/181 (69.6%)
# Gaps: 40/181 (22.1%)
# Score: 573.0
#
#
#=======================================
BSNT_01642 1 MLLQSDDEFHNFQFRSEKNNKLVQDTVHILNYSHNYNVMVGRDIDGAETY 50
:|||:||||||
RBAM_009790__ 1 ---------------------------------------MGRDLDGAETY 11
BSNT_01642 51 RISELAALAGVTKRTVDYYTNLGLLTPARSCSNYRYYDENALKRLIFIVD 100
||||||.||||||||||||||||||.|.||||||||||..||.||.|||.
RBAM_009790__ 12 RISELAELAGVTKRTVDYYTNLGLLKPDRSCSNYRYYDTLALNRLKFIVA 61
BSNT_01642 101 CKKQRLALSDIKDRLENQFPSSAKLDDEIGNLALEIDHMNQNISGILHRF 150
||||||||||||||||||||||| |.|:|||||.||||||||||.||:||
RBAM_009790__ 62 CKKQRLALSDIKDRLENQFPSSA-LPDDIGNLASEIDHMNQNISVILNRF 110
BSNT_01642 151 ERLKPEDRDKLKSKLPPEKLAVFQSFMLLLS 181
|:|:||:|.:||.:|.||||||.||||||||
RBAM_009790__ 111 EKLEPEERAQLKKRLAPEKLAVLQSFMLLLS 141
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