Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01610 and RBAM_009610

See DNA alignment / Visit BSNT_01610 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01610___yhdB.1.9828.seq
#    -bsequence pep-align/RBAM_009610___yhdB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01610___yhdB-RBAM_009610___yhdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01610___yhdB-RBAM_009610___yhdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01610___yhdB
# 2: RBAM_009610___yhdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      71/80 (88.8%)
# Similarity:    76/80 (95.0%)
# Gaps:           0/80 ( 0.0%)
# Score: 379.0
# 
#
#=======================================

BSNT_01610___      1 MDYADYDKALYYTHRSQWDNLLILMVRTEDDLLSKRIEHFLHAYHFEQDY     50
                     ||:|||||||||||||||||||||||||:||||||||||||||||||.|:
RBAM_009610__      1 MDHADYDKALYYTHRSQWDNLLILMVRTKDDLLSKRIEHFLHAYHFEYDH     50

BSNT_01610___     51 AVLEKMLYSLLRYIDHATELTYEDQIALLT     80
                     |||||.|||||.||||||||.||||:|:||
RBAM_009610__     51 AVLEKELYSLLGYIDHATELAYEDQLAMLT     80


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