Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01581 and RBAM_009410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence pep-align/BSNT_01581___yhcM.1.9828.seq
# -bsequence pep-align/RBAM_009410___yhcM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01581___yhcM-RBAM_009410___yhcM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01581___yhcM-RBAM_009410___yhcM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01581___yhcM
# 2: RBAM_009410___yhcM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 71/200 (35.5%)
# Similarity: 107/200 (53.5%)
# Gaps: 60/200 (30.0%)
# Score: 313.5
#
#
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BSNT_01581___ 1 MLFNQRRGISPTALIIGSTMLIAALSPQIRHRISGFITGQMNRRNSENNT 50
:|.::.|||||||:|||::|||||||:||.:|||.::|:|..::..::.
RBAM_009410__ 1 -MFRKKSGISPTALLIGSSILIAALSPEIRRKISGMVSGRMQHKDGTHSM 49
BSNT_01581___ 51 FDASNVGNIVKQAFSGGSGDNQ--DRSQNQ-------------------- 78
..| ::::|||||.||..| |::::.
RBAM_009410__ 50 QPA----DLIQQAFSGESGGQQHADKARHSQTGSLQPAELIKQAFGGESG 95
BSNT_01581___ 79 -SQRQNGRQHQHAGQQQP---------------QHQ----------HTQS 102
.|..:..:|...|..|| ||: ||..
RBAM_009410__ 96 GQQHTDKARHSQTGSLQPAELIKQAFGGESGGQQHEQTSRNHAGSSHTDG 145
BSNT_01581___ 103 Q---TRQTETAAKKRQPHYAEPIHFEQSAMNVMDDNTMMEMLEDLEPGR- 148
| :|..||:.| |||.||||||:||:||::|:|:|.|||::|||.
RBAM_009410__ 146 QADRSRSKETSPK---PHYTEPIHFEESAVNVLNDSTVMNMLEEIEPGNH 192
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