Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01544 and RBAM_009400

See DNA alignment / Visit BSNT_01544 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_01544___yhcL.1.9828.seq
#    -bsequence pep-align/RBAM_009400___yhcL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01544___yhcL-RBAM_009400___yhcL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01544___yhcL-RBAM_009400___yhcL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01544___yhcL
# 2: RBAM_009400___yhcL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity:     408/463 (88.1%)
# Similarity:   437/463 (94.4%)
# Gaps:           0/463 ( 0.0%)
# Score: 2046.0
# 
#
#=======================================

BSNT_01544___      1 METLLVVLHVFILFLLILGLFVMQKKHVSFSKRVFTALGLGIVFGFALQL     50
                     ||.|.|:||||||||.|.||||||||||||||||||||||||||||||||
RBAM_009400__      1 MENLFVILHVFILFLFIAGLFVMQKKHVSFSKRVFTALGLGIVFGFALQL     50

BSNT_01544___     51 IYGPTSNIVIQTADWFNIAGGGYVKLLQMVVMPLVFISILGAFTKLKLTK    100
                     ||||.|::|.:||||||||||||||||||:|||||||||||||||||||.
RBAM_009400__     51 IYGPASHVVTKTADWFNIAGGGYVKLLQMIVMPLVFISILGAFTKLKLTH    100

BSNT_01544___    101 NLGKISGLIIGILVATTAVAAAVGIASALSFDLQAIQVDQGSTELSRGQE    150
                     |:|||||||||||:||||:||||||.|||||||:|:.:||||||||||||
RBAM_009400__    101 NIGKISGLIIGILIATTAIAAAVGIVSALSFDLKAVHIDQGSTELSRGQE    150

BSNT_01544___    151 LQQKSEDMTAKTLPQQIVELLPGNPFLDFTGARPTSTIAVVIFAAFLGVA    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||:|
RBAM_009400__    151 LQQKSEDMTAKTLPQQIVELLPGNPFLDFTGARPTSTIGVVIFAAFLGIA    200

BSNT_01544___    201 FLGVKHKQPEQAETFKKLVDAVYAIVMRVVTLILRLTPYGVLAIMTKTIA    250
                     |||||.||||.|.||..:|||||||:||||||||||||||||||||||||
RBAM_009400__    201 FLGVKRKQPEHAATFSGIVDAVYAIIMRVVTLILRLTPYGVLAIMTKTIA    250

BSNT_01544___    251 TSDLDSILKLGMFVIASYAALITMFIIHLLLLTFSGLNPVIYLKKAVPVL    300
                     |||:|||.||||||||||||||.||||||||:|||||||:.|:|||.||:
RBAM_009400__    251 TSDIDSIAKLGMFVIASYAALIAMFIIHLLLITFSGLNPITYVKKAFPVM    300

BSNT_01544___    301 VFAFTSRSSAGALPLNIKTQRSMGVPEGIANFAGSFGLSIGQNGCAGIYP    350
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_009400__    301 VFAFTSRSSAGALPLNIKTQKSMGVPEGIANFAGSFGLSIGQNGCAGIYP    350

BSNT_01544___    351 AMLAMMIAPTVGQNPFDPVFIITVIAVVAISSFGVAGVGGGATFAALLVL    400
                     ||||||||||||||||:|.|||:|||:|||||||||||||||||||||||
RBAM_009400__    351 AMLAMMIAPTVGQNPFEPGFIISVIAIVAISSFGVAGVGGGATFAALLVL    400

BSNT_01544___    401 SSLNMPVALAGLLISIEPLIDMGRTALNVSGSMTSGLITSKVTKEIDQGA    450
                     |:||||||||||||||||||||||||||||||||:||:|||:|||.|...
RBAM_009400__    401 SALNMPVALAGLLISIEPLIDMGRTALNVSGSMTAGLLTSKMTKETDTAV    450

BSNT_01544___    451 FHDQSRVIEAEEA    463
                     ::|.|.|||||||
RBAM_009400__    451 YNDSSIVIEAEEA    463


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