Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01537 and RBAM_009350

See DNA alignment / Visit BSNT_01537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_01537___yhcH.1.9828.seq
#    -bsequence pep-align/RBAM_009350___yhcH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01537___yhcH-RBAM_009350___yhcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01537___yhcH-RBAM_009350___yhcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01537___yhcH
# 2: RBAM_009350___yhcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     247/305 (81.0%)
# Similarity:   280/305 (91.8%)
# Gaps:           0/305 ( 0.0%)
# Score: 1288.0
# 
#
#=======================================

BSNT_01537___      1 MKTVLELKNVTKNIRGRTIINDLSFTIREGEVFGFLGPNGAGKTTTIRMM     50
                     |:|||||:.|.|.|:|||||:||||::|.|||||||||||||||||||||
RBAM_009350__      1 METVLELQQVKKTIKGRTIIHDLSFSVRAGEVFGFLGPNGAGKTTTIRMM     50

BSNT_01537___     51 VGLMKLSKGDVLICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQ    100
                     |||||||:||::|||:||||.||||::|:|||||||||||||||||||||
RBAM_009350__     51 VGLMKLSQGDIVICGESITKNYAKAVRHVGAIVENPELYKFLSGYKNLQQ    100

BSNT_01537___    101 YARMVKGVTKEKIDEVVELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHD    150
                     ||||||||||||||||:|||||.||||||||||||||||||||||.|||:
RBAM_009350__    101 YARMVKGVTKEKIDEVIELVGLQDRIHDKVKTYSLGMRQRLGLAQSLLHN    150

BSNT_01537___    151 PKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMELMC    200
                     |||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_009350__    151 PKVLILDEPTNGLDPAGIREIRDHLKKLTREKGMAVIVSSHLLSEMELMC    200

BSNT_01537___    201 DRIAILQKGKLIDIQNVKDENIDENDTYFFQVEQPNEAAAVLNQYDLLSK    250
                     |||.|||||:|:|||.|:||..::.|||||.:||..||.|||:|:|.:.|
RBAM_009350__    201 DRIGILQKGELVDIQKVRDEGKEDKDTYFFHIEQREEALAVLSQFDCVKK    250

BSNT_01537___    251 TNGVEIKLAKDEVPAVIELLVMQQIRIYEVKVITKSLEDRFLEMTGETKE    300
                     |||:||||:|.|||.||.|||.:.||:||||::||||||||||:||.|||
RBAM_009350__    251 TNGIEIKLSKQEVPDVISLLVRENIRLYEVKIMTKSLEDRFLEITGGTKE    300

BSNT_01537___    301 EVQHA    305
                     |||:.
RBAM_009350__    301 EVQYV    305


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